RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 TRIT1Q9H3H1 467 aaKnown RBP12.63□□□□□ -0.39
CTNNB1-201ENST00000349496 WARS2Q9UGM6 360 aaKnown RBP12.63□□□□□ -0.39
CTNNB1-201ENST00000349496 EBF1Q9UH73 591 aa12.63□□□□□ -0.39
CTNNB1-201ENST00000349496 XIRP1Q702N8 1843 aaKnown RBP12.63□□□□□ -0.39
CTNNB1-201ENST00000349496 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 FOXN3O00409 490 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 CLASP2O75122 1294 aaKnown RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 OR5F1O95221 314 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 BMXP51813 675 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 MEI1Q5TIA1 1274 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 DCP2Q8IU60 420 aaKnown RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ZCCHC7Q8N3Z6 543 aaKnown RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ANKLE1Q8NAG6 615 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 FAM172AQ8WUF8 416 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 FOXP1Q9H334 677 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 TMEM260Q9NX78 707 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 CCNL1Q9UK58 526 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 STRIP2Q9ULQ0 834 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 PMF1-BGLAPU3KQ54 211 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 LAMB4A4D0S4 1761 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 CENPXA8MT69 81 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ARHGAP33O14559 1287 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 SMIM18P0DKX4 95 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 SRGNP10124 158 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ATXN3P54252 364 aaPredicted RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 PEX3P56589 373 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ATAD3BQ5T9A4 648 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 RASSF5Q8WWW0 418 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 DCUN1D1Q96GG9 259 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 CDH19Q9H159 772 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 DNAJC18Q9H819 358 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 RIMKLBQ9ULI2 386 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 SCAF8Q9UPN6 1271 aaKnown RBP12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 FAM172BPA6NC97 362 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 MEI4A8MW99 385 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 TAP1Q03518 808 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 NME3Q13232 169 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 SH3RF1Q7Z6J0 888 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 SCFD1Q8WVM8 642 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 PKD2L2Q9NZM6 624 aa12.62□□□□□ -0.39
CTNNB1-201ENST00000349496 PNPLA7Q6ZV29 1317 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 NOP56O00567 594 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 IFNA14P01570 189 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 SLC12A2P55011 1212 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 MLLT6P55198 1093 aaPredicted RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 SNAP25P60880 206 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 DLG4P78352 724 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 TRIM71Q2Q1W2 868 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 VSTM1Q6UX27 236 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 JAMLQ86YT9 394 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 LSMEM2Q8N112 164 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 ZNF786Q8N393 782 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 SLC15A4Q8N697 577 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PNMA1Q8ND90 353 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 NEDD1Q8NHV4 660 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PANX3Q96QZ0 392 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 TMEM246Q9BRR3 403 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 CNOT7Q9UIV1 285 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PLAGL2Q9UPG8 496 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 ERGIC3Q9Y282 383 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 AP3M1Q9Y2T2 418 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 NR2E3Q9Y5X4 410 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 NUP98P52948 1817 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 CNTNAP5Q8WYK1 1306 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 C16orf96A6NNT2 1141 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 RPN1P04843 607 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 MAGP20916 626 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PON1P27169 355 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 SCNN1DP51172 638 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 SCRN3Q0VDG4 424 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 C6orf132Q5T0Z8 1188 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PPP1R26Q5T8A7 1209 aaPredicted RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 BTBD8Q5XKL5 378 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 UNC5DQ6UXZ4 953 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 FAM196AQ6ZSG2 479 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 LRRC47Q8N1G4 583 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 AFAP1L2Q8N4X5 818 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 RMND5BQ96G75 393 aaPredicted RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 BTBD9Q96Q07 612 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PPP1R16BQ96T49 567 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 IFT22Q9H7X7 185 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 NTN4Q9HB63 628 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 LRRC4BQ9NT99 713 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PARVAQ9NVD7 372 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 FETUBQ9UGM5 382 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 RTCBQ9Y3I0 505 aaKnown RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 PCDHAC2Q9Y5I4 1007 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 ARHGEF37A1IGU5 675 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 RAB19A4D1S5 217 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 FCHO1O14526 889 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 TRAFD1O14545 582 aaPredicted RBP12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 ENPP3O14638 875 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 CXCR2P25025 360 aa12.61□□□□□ -0.39
CTNNB1-201ENST00000349496 ALDH18A1P54886 795 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms