RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 CES3Q6UWW8 571 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 DENND5BQ6ZUT9 1274 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 B3GALNT2Q8NCR0 500 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SMG8Q8ND04 991 aaKnown RBP14.44□□□□□ -0.1
TRIM4-201ENST00000349062 RNF157Q96PX1 679 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 AGO3Q9H9G7 860 aaKnown RBP14.44□□□□□ -0.1
TRIM4-201ENST00000349062 ZFYVE28Q9HCC9 887 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 SLCO1B3Q9NPD5 702 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 COL1A2P08123 1366 aa14.44□□□□□ -0.1
TRIM4-201ENST00000349062 APOC4-APOC2K7ER74 178 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 USP12O75317 370 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 APOC2P02655 101 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 HHATQ5VTY9 493 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 KDELC2Q7Z4H8 507 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 PPIL6Q8IXY8 311 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 PLD5Q8N7P1 536 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 CCT6BQ92526 530 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 ATXN7L3BQ96GX2 97 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SENP8Q96LD8 212 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TSPYL2Q9H2G4 693 aaPredicted RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TRMT13Q9NUP7 481 aaKnown RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TTC3P53804 2025 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 A8MUI8 341 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 AP1G2O75843 785 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TKTL1P51854 596 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 MCCD1P59942 119 aaPredicted RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 PURAQ00577 322 aaKnown RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 BST2Q10589 180 aaKnown RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 BMPR2Q13873 1038 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 VSTM1Q6UX27 236 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 ZNF467Q7Z7K2 595 aaPredicted RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 IFNL1Q8IU54 200 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TRPV1Q8NER1 839 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SLC35F5Q8WV83 523 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 EMID1Q96A84 441 aaPredicted RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 KLHL29Q96CT2 875 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SMC6Q96SB8 1091 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SPC25Q9HBM1 224 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 KBTBD13C9JR72 458 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 ITGAVP06756 1048 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SRGAP2BP0DMP2 458 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 NCAM1P13591 858 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 RPA3P35244 121 aaPredicted RBP14.43□□□□□ -0.1
TRIM4-201ENST00000349062 MSH2P43246 934 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 PRKCZQ05513 592 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 INCA1Q0VD86 236 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 OVGP1Q12889 678 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TFDP2Q14188 446 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SDHAF4Q5VUM1 108 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 KCNT2Q6UVM3 1135 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TTC13Q8NBP0 860 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 ZNF560Q96MR9 790 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SERPINB12Q96P63 405 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 APOL2Q9BQE5 337 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SLC13A1Q9BZW2 595 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 SLC17A6Q9P2U8 582 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 TRIM33Q9UPN9 1127 aa14.43□□□□□ -0.1
TRIM4-201ENST00000349062 UBOX5O94941 541 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 CD4P01730 458 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 OR4Q2P0C623 313 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 COPS2P61201 443 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 MORN1Q5T089 497 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 UBXN11Q5T124 520 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 ATXN2LQ8WWM7 1075 aaKnown RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 TRIB2Q92519 343 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 SLCO2A1Q92959 643 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 UBP1Q9NZI7 540 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 PRG3Q9Y2Y8 225 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 PLXNA1Q9UIW2 1896 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 PTGESO14684 152 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 AKR1A1P14550 325 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 BCAT1P54687 386 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 GPX6P59796 221 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 POU5F1BQ06416 359 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 MORF4L2Q15014 288 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 POLNQ7Z5Q5 900 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 C3orf58Q8NDZ4 430 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 CMASQ8NFW8 434 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 ULBP1Q9BZM6 244 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 XPOTO43592 962 aaKnown RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 MOCS2O96007 188 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 PTPN1P18031 435 aaKnown RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 ATP5DP30049 168 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 ARL4AP40617 200 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 STAT4Q14765 748 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 KYAT1Q16773 422 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 TRPM8Q7Z2W7 1104 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 SAPCD2Q86UD0 394 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 SCN4BQ8IWT1 228 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 UNC5BQ8IZJ1 945 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 NIPA2Q8N8Q9 360 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 USP33Q8TEY7 942 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 AGAP11Q8TF27 550 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 NKD2Q969F2 451 aaPredicted RBP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 PAFAH2Q99487 392 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 ETNK1Q9HBU6 452 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 FAM105AQ9NUU6 356 aa14.42□□□□□ -0.1
TRIM4-201ENST00000349062 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.42□□□□□ -0.1
TRIM4-201ENST00000349062 DCTN4Q9UJW0 460 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms