RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 H7C0C1 242 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 PMM2O15305 246 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 CD48P09326 243 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 ATP5OP48047 213 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 CRADDP78560 199 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 MORF4L2Q15014 288 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 APOBEC3HQ6NTF7 200 aaKnown RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 HAUS6Q7Z4H7 955 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 C12orf56Q8IXR9 622 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 NETO2Q8NC67 525 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 GMCL1Q96IK5 515 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 NDEL1Q9GZM8 345 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 EBF1Q9UH73 591 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 RSL24D1Q9UHA3 163 aaKnown RBP15.69■□□□□ 0.1
PTBP1-201ENST00000349038 DMTF1Q9Y222 760 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 EFR3BQ9Y2G0 817 aa15.69■□□□□ 0.1
PTBP1-201ENST00000349038 FBP2O00757 339 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 BBOX1O75936 387 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 TNFAIP8O95379 198 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 GSTT2P0CG29 244 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 RPL22P35268 128 aaKnown RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 OXCT1P55809 520 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 LMNB2Q03252 620 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ORC1Q13415 861 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 SPDYAQ5MJ70 313 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 KRT39Q6A163 491 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 PLEKHA7Q6IQ23 1121 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ADGRD1Q6QNK2 874 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 SV2AQ7L0J3 742 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 CHST15Q7LFX5 561 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 RELL1Q8IUW5 271 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 SNX31Q8N9S9 440 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 GMCL1P1Q8NEA9 526 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 TSPAN14Q8NG11 270 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 SHC3Q92529 594 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 UNKQ9C0B0 810 aaKnown RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ACSS3Q9H6R3 686 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 RAB6BQ9NRW1 208 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 KCNK4Q9NYG8 393 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 CCNL1Q9UK58 526 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 GMEB1Q9Y692 573 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 TMEM247A6NEH6 219 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ZFXP17010 805 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 KLF1Q13351 362 aaPredicted RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 PLA2G4FQ68DD2 849 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 DARS2Q6PI48 645 aaKnown RBP15.68■□□□□ 0.1
PTBP1-201ENST00000349038 CYP2R1Q6VVX0 501 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 SCARA5Q6ZMJ2 495 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 PQLC1Q8N2U9 271 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 FBXL13Q8NEE6 735 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF577Q9BSK1 485 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 TCHPQ9BT92 498 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 ADA2Q9NZK5 511 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 VPS51Q9UID3 782 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 STRIP2Q9ULQ0 834 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 NR2E3Q9Y5X4 410 aa15.68■□□□□ 0.1
PTBP1-201ENST00000349038 CAPN14A8MX76 684 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 NDUFB10O96000 172 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 THRAP10827 490 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ITGADQ13349 1161 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 CDO1Q16878 200 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 BRDTQ58F21 947 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 PDPK2PQ6A1A2 396 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 TATDN1Q6P1N9 297 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 LAYNQ6UX15 382 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 BHLHE22Q8NFJ8 381 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 WDR83Q9BRX9 315 aaKnown RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 HBS1LQ9Y450 684 aaKnown RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 TELO2Q9Y4R8 837 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 DYTNA2CJ06 578 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 TESPA1A2RU30 521 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 SIN3BO75182 1162 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ARP10275 920 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 PSMC3P17980 439 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 CDH2P19022 906 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ACOT2P49753 483 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 FASTKD1Q53R41 847 aaKnown RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 PERM1Q5SV97 790 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF786Q8N393 782 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 TMEM79Q9BSE2 394 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 NDUFA13Q9P0J0 144 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 KRT37O76014 449 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ZBTB11O95625 1053 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 CLIC3O95833 236 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 MCCD1P59942 119 aaPredicted RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 EIF3EP60228 445 aaKnown RBP15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ITGA7Q13683 1181 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 HHIPL2Q6UWX4 724 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 SPOCD1Q6ZMY3 1216 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 ZNF410Q86VK4 478 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 SNX29P2Q8IUI4 249 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 SACM1LQ9NTJ5 587 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 CDC14AQ9UNH5 594 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 SNX13Q9Y5W8 968 aa15.67■□□□□ 0.1
PTBP1-201ENST00000349038 PDLIM1O00151 329 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 AGRPO00253 132 aa15.66■□□□□ 0.1
PTBP1-201ENST00000349038 HNRNPDLO14979 420 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms