RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SGCGQ13326 291 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 EMC2Q15006 297 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 MSANTD1Q6ZTZ1 278 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 IL17RAQ96F46 866 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CALR3Q96L12 384 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PAIP1Q9H074 479 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 SH3BP4Q9P0V3 963 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 WWP2O00308 870 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 KPNA5O15131 536 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 KPNA6O60684 536 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PDE9AO76083 593 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TFE3P19532 575 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 SKIV2L2P42285 1042 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF200P98182 395 aaPredicted RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 DDR2Q16832 855 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 DAB2IPQ5VWQ8 1189 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TRIM72Q6ZMU5 477 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PROM2Q8N271 834 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ENKURQ8TC29 256 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CPA5Q8WXQ8 436 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 C18orf8Q96DM3 657 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 SMARCAL1Q9NZC9 954 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CEP72Q9P209 647 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ATP8B1O43520 1251 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 PMPCBO75439 489 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 MPOP05164 745 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ALG11Q2TAA5 492 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 EIF2S3LQ2VIR3 472 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 CYP20A1Q6UW02 462 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 TMEM169Q96HH4 297 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 GMCL1Q96IK5 515 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ZDHHC15Q96MV8 337 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 ZC3H13Q5T200 1668 aaKnown RBP12.14□□□□□ -0.47
TRAF3-201ENST00000347662 MEGF6O75095 1541 aa12.14□□□□□ -0.47
TRAF3-201ENST00000347662 STX7O15400 261 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 HS6ST1O60243 411 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MAGEA9P43362 315 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PTSQ03393 145 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 AMHR2Q16671 573 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PLEKHA7Q6IQ23 1121 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 SLC30A5Q8TAD4 765 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CNPPD1Q9BV87 410 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MSH4O15457 936 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 VPS4BO75351 444 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MBL2P11226 248 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MTM1Q13496 603 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 TRMT11Q7Z4G4 463 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CACUL1Q86Y37 369 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 GRAMD1AQ96CP6 724 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 SOHLH2Q9NX45 425 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PHF11Q9UIL8 331 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 FAM20BO75063 409 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CCNB2O95067 398 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 SERPINB5P36952 375 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 HALP42357 657 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ATP2C1P98194 919 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 SV2CQ496J9 727 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 TTC39BQ5VTQ0 682 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ENGASEQ8NFI3 743 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MXRA8Q9BRK3 442 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 TEX33O43247 280 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ATG7O95352 703 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 POLBP06746 335 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CKBP12277 381 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MYL12AP19105 171 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 RAB2AP61019 212 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ZC2HC1CQ53FD0 456 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 BRSK2Q8IWQ3 736 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF579Q8NAF0 562 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF333Q96JL9 665 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 EVA1BQ9NVM1 165 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 TNFSF13BQ9Y275 285 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ZNF189O75820 626 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 KLHL2O95198 593 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 RCAN1P53805 252 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 SGF29Q96ES7 293 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MCEEQ96PE7 176 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 INTS2Q9H0H0 1204 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CCDC177Q9NQR7 707 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 ALKBH4Q9NXW9 302 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 DUSP12Q9UNI6 340 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MORC2Q9Y6X9 1032 aaPredicted RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 H3BN98 237 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PDHXO00330 501 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 HBP1O60381 514 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 NDUFS2O75306 463 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 FGFR2P21802 821 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 MARSP56192 900 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 CCDC54Q8NEL0 328 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 REEP2Q9BRK0 252 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 KCNQ5Q9NR82 932 aa12.13□□□□□ -0.47
TRAF3-201ENST00000347662 WBP11Q9Y2W2 641 aaKnown RBP12.13□□□□□ -0.47
TRAF3-201ENST00000347662 PVALEFA0A1B0GWK0 134 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 DDTLA6NHG4 134 aaPredicted RBP12.12□□□□□ -0.47
TRAF3-201ENST00000347662 NPTXRO95502 500 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 IGFBP4P22692 258 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 MYBPC1Q00872 1141 aa12.12□□□□□ -0.47
TRAF3-201ENST00000347662 C4orf46Q504U0 113 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms