RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 RETSATQ6NUM9 610 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 LPCAT1Q8NF37 534 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 OSBPL6Q9BZF3 934 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 AGO4Q9HCK5 861 aaKnown RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 RRN3Q9NYV6 651 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MAGEB16A2A368 324 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 GSTM1P09488 218 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MAPK9P45984 424 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 PRKAA1Q13131 559 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 MAD2L1Q13257 205 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 TRAF7Q6Q0C0 670 aa23.76■■□□□ 1.39
NPAS3-201ENST00000346562 BNC2Q6ZN30 1099 aaPredicted RBP23.76■■□□□ 1.39
NPAS3-201ENST00000346562 H0YC42 278 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 ZNF786Q8N393 782 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 GMCL1Q96IK5 515 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 SPHKAPQ2M3C7 1700 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 CASTOR2A6NHX0 329 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 KCNT1Q5JUK3 1230 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 FBXO47Q5MNV8 452 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 VPS33AQ96AX1 596 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 SMAD5Q99717 465 aaKnown RBP23.75■■□□□ 1.39
NPAS3-201ENST00000346562 NCKAP1Q9Y2A7 1128 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 FOXN3O00409 490 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-201ENST00000346562 IGF2BP3O00425 579 aaKnown RBP eCLIP23.75■■□□□ 1.39
NPAS3-201ENST00000346562 CYP2A6P11509 494 aaPredicted RBP23.75■■□□□ 1.39
NPAS3-201ENST00000346562 CCR1P32246 355 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 TGFB2P61812 414 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 METTL7BQ6UX53 244 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 KIF2BQ8N4N8 673 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 MTERF3Q96E29 417 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 FBXO28Q9NVF7 368 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 DDX43Q9NXZ2 648 aaKnown RBP23.75■■□□□ 1.39
NPAS3-201ENST00000346562 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 TPBGLP0DKB5 382 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 VN1R5Q7Z5H4 357 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 PDLIM2Q96JY6 352 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 GPRC5DQ9NZD1 345 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 CPA4Q9UI42 421 aa23.75■■□□□ 1.39
NPAS3-201ENST00000346562 ZNF839A8K0R7 811 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 NR5A2O00482 541 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 ZNF682O95780 498 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 KLRC2P26717 231 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 HSD17B3P37058 310 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 TXNRD3Q86VQ6 643 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 MRPL9Q9BYD2 267 aaKnown RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 UXTQ9UBK9 157 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 POLG2Q9UHN1 485 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 UBTFL6P0CB48 400 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 DNAJB2P25686 324 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 GLRBP48167 497 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 KRR1Q13601 381 aaKnown RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 NAA30Q147X3 362 aaPredicted RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 HLA-DQA1Q5Y7H0 255 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 REPS1Q96D71 796 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 EHD4Q9H223 541 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 SENP2Q9HC62 589 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 XYLBO75191 536 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 RPN2P04844 631 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 ARP10275 920 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 LAMTOR4Q0VGL1 99 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 TRMT11Q7Z4G4 463 aaKnown RBP23.74■■□□□ 1.39
NPAS3-201ENST00000346562 DSG4Q86SJ6 1040 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 TERB1Q8NA31 727 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 ACOT9Q9Y305 439 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 AP4S1Q9Y587 144 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 TMEM114B3SHH9 223 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 CYP4F12Q9HCS2 524 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 NFICP08651 508 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 ZNF286BP0CG31 522 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 WEE1P30291 646 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 DNAJC3Q13217 504 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 USP6NLQ92738 828 aa23.74■■□□□ 1.39
NPAS3-201ENST00000346562 CLTBP09497 229 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 SCNN1BP51168 640 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 C4orf19Q8IY42 314 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 ACER1Q8TDN7 264 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 FGFR2P21802 821 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 MED8Q96G25 268 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 SYT15Q9BQS2 421 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 PHACTR1Q9C0D0 580 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 TRPC4Q9UBN4 977 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 CHD1O14646 1710 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 CNPP09543 421 aaKnown RBP23.73■■□□□ 1.39
NPAS3-201ENST00000346562 NME5P56597 212 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 EZH2Q15910 746 aaKnown RBP23.73■■□□□ 1.39
NPAS3-201ENST00000346562 GRIK4Q16099 956 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 TDRD5Q8NAT2 981 aaKnown RBP23.73■■□□□ 1.39
NPAS3-201ENST00000346562 CSGALNACT1Q8TDX6 532 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 ACTR8Q9H981 624 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 NCKIPSDQ9NZQ3 722 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 RBAK-RBAKDNI3L0D1 243 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 FCGR1AP12314 374 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 GRK4P32298 578 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 TBX4P57082 545 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 PTGISQ16647 500 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 USP49Q70CQ1 688 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 GPR141Q7Z602 305 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 ZDHHC17Q8IUH5 632 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 EXD1Q8NHP7 514 aa23.73■■□□□ 1.39
NPAS3-201ENST00000346562 NBNO60934 754 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms