RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.9■□□□□ 0.3
RAB5C-201ENST00000346213 CNTN6Q9UQ52 1028 aa16.9■□□□□ 0.3
RAB5C-201ENST00000346213 MRPS17Q9Y2R5 130 aaKnown RBP16.9■□□□□ 0.3
RAB5C-201ENST00000346213 PRR23AA6NEV1 266 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 KLKB1P03952 638 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 RARGP13631 454 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 TBXAS1P24557 533 aaPredicted RBP16.89■□□□□ 0.29
RAB5C-201ENST00000346213 RGS7P49802 495 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 ADKP55263 362 aaKnown RBP16.89■□□□□ 0.29
RAB5C-201ENST00000346213 GCNT1Q02742 428 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 GOLGA8FQ08AF8 430 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 GOLGA8DPQ0D2H9 430 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 DHCR24Q15392 516 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 SGO2Q562F6 1265 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 PMF1Q6P1K2 205 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 CC2D1AQ6P1N0 951 aaPredicted RBP16.89■□□□□ 0.29
RAB5C-201ENST00000346213 CCAR2Q8N163 923 aaKnown RBP16.89■□□□□ 0.29
RAB5C-201ENST00000346213 PHTF2Q8N3S3 785 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 FBXO44Q9H4M3 255 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 EHD2Q9NZN4 543 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 TJP2Q9UDY2 1190 aa16.89■□□□□ 0.29
RAB5C-201ENST00000346213 KIAA1549LQ6ZVL6 1849 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 XPO1O14980 1071 aaKnown RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 ARHGAP6O43182 974 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 LAMTOR5O43504 91 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 GYPCP04921 128 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 TPM1P09493 284 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 VDRP11473 427 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 PON1P27169 355 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 TKTL1P51854 596 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 LCLAT1Q6UWP7 414 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 CNGA4Q8IV77 575 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 SECISBP2LQ93073 1101 aaKnown RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 ATP2A3Q93084 1043 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 MSANTD3Q96H12 275 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 BAG1Q99933 345 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 TLR8Q9NR97 1041 aaKnown RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 NAGPAQ9UK23 515 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 HCN2Q9UL51 889 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 DCHS1Q96JQ0 3298 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 YJEFN3A6XGL0 299 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 E7ENQ6 273 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 MFAP3LO75121 409 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 PLA2G4AP47712 749 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 ADIGQ0VDE8 80 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 KCNMA1Q12791 1236 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 SRSF5Q13243 272 aaKnown RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 DNTTIP2Q5QJE6 756 aaKnown RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 LY6G5CQ5SRR4 150 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 PM20D1Q6GTS8 502 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 DENND1BQ6P3S1 775 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 Q6ZNB5 142 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 TMEM25Q86YD3 366 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 CPA6Q8N4T0 437 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 SLC35F5Q8WV83 523 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 FAM124BQ9H5Z6 455 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 UBE2TQ9NPD8 197 aaPredicted RBP16.88■□□□□ 0.29
RAB5C-201ENST00000346213 ZDHHC4Q9NPG8 344 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 FANCMQ8IYD8 2048 aa16.88■□□□□ 0.29
RAB5C-201ENST00000346213 MYH10P35580 1976 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 K7EQS6 105 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 RNF40O75150 1001 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 PAEPP09466 180 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 CASP14P31944 242 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 BCAT1P54687 386 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 BST2Q10589 180 aaKnown RBP16.87■□□□□ 0.29
RAB5C-201ENST00000346213 MAN2A1Q16706 1144 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 E4F1Q66K89 784 aaPredicted RBP16.87■□□□□ 0.29
RAB5C-201ENST00000346213 TTC39CQ8N584 583 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 ZBTB44Q8NCP5 570 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 ERGIC2Q96RQ1 377 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 P2RY13Q9BPV8 354 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 NAA15Q9BXJ9 866 aaKnown RBP16.87■□□□□ 0.29
RAB5C-201ENST00000346213 UBXN6Q9BZV1 441 aa16.87■□□□□ 0.29
RAB5C-201ENST00000346213 E2F8A0AVK6 867 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 M0QYV0 167 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 STC2O76061 302 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 HNRNPLP14866 589 aaKnown RBP eCLIP16.86■□□□□ 0.29
RAB5C-201ENST00000346213 FECHP22830 423 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 PXNP49023 591 aaPredicted RBP16.86■□□□□ 0.29
RAB5C-201ENST00000346213 KLK7P49862 253 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 MIB1Q86YT6 1006 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 ETFBKMTQ8IXQ9 262 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 PIWIL1Q96J94 861 aaKnown RBP16.86■□□□□ 0.29
RAB5C-201ENST00000346213 FBXO4Q9UKT5 387 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 ZNF292O60281 2723 aa16.86■□□□□ 0.29
RAB5C-201ENST00000346213 USP27XA6NNY8 438 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 CCP110O43303 1012 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 GFRA3O60609 400 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 LILRB5O75023 590 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 ZBED1O96006 694 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 MAGEA9P43362 315 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 PDE6CP51160 858 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 YWHAGP61981 247 aaKnown RBP eCLIP16.85■□□□□ 0.29
RAB5C-201ENST00000346213 CNGA2Q16280 664 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 VWA3BQ502W6 1294 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 C10orf120Q5SQS8 335 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 FKBP15Q5T1M5 1219 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 MAMSTRQ6ZN01 415 aa16.85■□□□□ 0.29
RAB5C-201ENST00000346213 SPEM1Q8N4L4 309 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms