RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 KLHL11Q9NVR0 708 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 OSER1Q9NX31 292 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 INSL5Q9Y5Q6 135 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 PI4K2BG5E9Z4 385 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 H3BNC9 293 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 TADA3O75528 432 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 ZDHHC11BP0C7U3 371 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 CSH1P0DML2 217 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 CSH2P0DML3 217 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 HMGA1P17096 107 aaKnown RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 KLRC2P26717 231 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 PSEN1P49768 467 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 DEUP1Q05D60 604 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 GPM6BQ13491 265 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 LONRF2Q1L5Z9 754 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 ZFYVE27Q5T4F4 411 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 MFSD7Q6UXD7 560 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 SLC13A5Q86YT5 568 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 CCDC50Q8IVM0 306 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 ADAM32Q8TC27 787 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 RNF25Q96BH1 459 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 MYRFLQ96LU7 910 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 NAP1L3Q99457 506 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 PIGVQ9NUD9 493 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 CLIC5Q9NZA1 410 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 FBXW11Q9UKB1 542 aa17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 TNRC18O15417 2968 aaPredicted RBP17.03■□□□□ 0.32
CEACAM1-202ENST00000344391 LRRD1A4D1F6 860 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 EFCAB8A8MWE9 144 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 MDM4O15151 490 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 F9P00740 461 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 IGLV3-25P01717 112 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 SPATA31D3P0C874 917 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 KDELR1P24390 212 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 BMP8BP34820 402 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 IRS1P35568 1242 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 COPS2P61201 443 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 TWF1Q12792 350 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 NME3Q13232 169 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 RAB30Q15771 203 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 ERMARDQ5T6L9 678 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 SPATA31D4Q6ZUB0 917 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 ANKS1BQ7Z6G8 1248 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 TAC4Q86UU9 113 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 FAM131BQ86XD5 332 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 MICAL1Q8TDZ2 1067 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 HSPH1Q92598 858 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 SNRNP25Q9BV90 132 aaKnown RBP17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 WDR6Q9NNW5 1121 aaKnown RBP17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 TLR8Q9NR97 1041 aaKnown RBP17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 MSRAQ9UJ68 235 aa17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 MAGED2Q9UNF1 606 aaPredicted RBP17.02■□□□□ 0.31
CEACAM1-202ENST00000344391 TRANK1O15050 2925 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 SYNJ2BP-COX16A0A087WUM0 186 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 LPXNO60711 386 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 CSPG5O95196 566 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 PTPN7P35236 360 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 CETN2P41208 172 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 ARSEP51690 589 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 TERF1P54274 439 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 EIF4EBP2Q13542 120 aaPredicted RBP17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 VEPH1Q14D04 833 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 TAZQ16635 292 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 ODF2Q5BJF6 829 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 SPOCD1Q6ZMY3 1216 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 RSRC2Q7L4I2 434 aaKnown RBP17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 KCTD6Q8NC69 237 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 OVCA2Q8WZ82 227 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 TRMT2BQ96GJ1 504 aaKnown RBP17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 HERPUD2Q9BSE4 406 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 OSBPL8Q9BZF1 889 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 NKX2-4Q9H2Z4 354 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 SMOC2Q9H3U7 446 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 FAM204AQ9H8W3 233 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 DDIT4Q9NX09 232 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 COX16Q9P0S2 106 aa17.01■□□□□ 0.31
CEACAM1-202ENST00000344391 KRIT1O00522 736 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 GLUD1P00367 558 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 C1RP00736 705 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 RALAP11233 206 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 RARGP13631 454 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 GTF2F1P35269 517 aaKnown RBP eCLIP17■□□□□ 0.31
CEACAM1-202ENST00000344391 CDKN2BP42772 138 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 CXCR3P49682 368 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 EPHB3P54753 998 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 C2orf54Q08AI8 447 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 PLD1Q13393 1074 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 LLGL1Q15334 1064 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 PPP2R5EQ16537 467 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 ZC3H12AQ5D1E8 599 aaKnown RBP17■□□□□ 0.31
CEACAM1-202ENST00000344391 PDE12Q6L8Q7 609 aaKnown RBP17■□□□□ 0.31
CEACAM1-202ENST00000344391 MSANTD2Q6P1R3 559 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 CCDC149Q6ZUS6 474 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 ZDHHC14Q8IZN3 488 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 NOA1Q8NC60 698 aaKnown RBP17■□□□□ 0.31
CEACAM1-202ENST00000344391 KREMEN2Q8NCW0 462 aa17■□□□□ 0.31
CEACAM1-202ENST00000344391 PDZD8Q8NEN9 1154 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms