RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 SNX25Q9H3E2 840 aa15.46■□□□□ 0.06
VIPAS39-202ENST00000343765 METTL18O95568 372 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 SETSIPP0DME0 302 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 DARSP14868 501 aaKnown RBP15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 L1CAMP32004 1257 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 BST2Q10589 180 aaKnown RBP15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 APBB1IPQ7Z5R6 666 aaPredicted RBP15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 FAM131BQ86XD5 332 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 LRRC52Q8N7C0 313 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 FAM149B1Q96BN6 582 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 TBCBQ99426 244 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 DERAQ9Y315 318 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 KPNA7A9QM74 516 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 MDM4O15151 490 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 UGT1A9O60656 530 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 GTF2A2P52657 109 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 BCAT1P54687 386 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 C10orf82Q8WW14 230 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 KCTD15Q96SI1 283 aaPredicted RBP15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 UGT1A7Q9HAW7 530 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 UGT1A10Q9HAW8 530 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 UGT1A8Q9HAW9 530 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 POPDC2Q9HBU9 364 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 HAO1Q9UJM8 370 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 TTLL3Q9Y4R7 772 aa15.45■□□□□ 0.06
VIPAS39-202ENST00000343765 SMIM28A0A1B0GU29 152 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 BCLAF3A2AJT9 711 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 RRN3P2A6NIE6 340 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 TRIM49D1C9J1S8 452 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 UNC5CO95185 931 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 AMPD1P23109 780 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 SOX4Q06945 474 aaPredicted RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 BMPR2Q13873 1038 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 SWT1Q5T5J6 900 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 KCNT2Q6UVM3 1135 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 PLEKHH3Q7Z736 793 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 MPP5Q8N3R9 675 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 RFWD2Q8NHY2 731 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 SYT17Q9BSW7 474 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 SSU72Q9NP77 194 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 TMPRSS4Q9NRS4 437 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 CNTN3Q9P232 1028 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 UBQLN1Q9UMX0 589 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 TM9SF1O15321 606 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 GOT1P17174 413 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 ACAT1P24752 427 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 TKTP29401 623 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 ALDH3A1P30838 453 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 GRIA1P42261 906 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 SMAD1Q15797 465 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 FYB2Q5VWT5 728 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 ASRGL1Q7L266 308 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 UNC93AQ86WB7 457 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 LRRC6Q86X45 466 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 CDKL3Q8IVW4 592 aaPredicted RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 ANKRD52Q8NB46 1076 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 CSPG4P5Q96PW8 444 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 MANSC1Q9H8J5 431 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 ARHGEF3Q9NR81 526 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 PIH1D1Q9NWS0 290 aaKnown RBP15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 MORF4L1Q9UBU8 362 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 L3MBTL1Q9Y468 752 aa15.44■□□□□ 0.06
VIPAS39-202ENST00000343765 A0A0G2JND7 137 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 CFAP69A5D8W1 941 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 CLDN5O00501 218 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 CBX6O95503 412 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SNX16P57768 344 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 PLEKHG4Q58EX7 1191 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 ARHGAP17Q68EM7 881 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 IQSEC1Q6DN90 963 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 VPS52Q8N1B4 723 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 CEP41Q9BYV8 373 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 PLAC1Q9HBJ0 212 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC5A4Q9NY91 659 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 TREHO43280 583 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 HOXD8P13378 290 aaPredicted RBP15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 TSHRP16473 764 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 BGNP21810 368 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 RABGGTBP53611 331 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 PITX1P78337 314 aaPredicted RBP15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 CCDC15Q0P6D6 951 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 DPYSL2Q16555 572 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC45A4Q5BKX6 768 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 TRMT10BQ6PF06 316 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 ALKAL1Q6UXT8 129 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 DENND5BQ6ZUT9 1274 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC26A9Q7LBE3 791 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 NLRP9Q7RTR0 991 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC26A11Q86WA9 606 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 ZNF276Q8N554 614 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 APPL2Q8NEU8 664 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 ALKBH8Q96BT7 664 aaKnown RBP15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 APOPT1Q96IL0 206 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 FAM124BQ9H5Z6 455 aaPredicted RBP15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 SMYD2Q9NRG4 433 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 TXLNGQ9NUQ3 528 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 MTMR10Q9NXD2 777 aa15.43■□□□□ 0.06
VIPAS39-202ENST00000343765 NRCAMQ92823 1304 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms