RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 PMM2O15305 246 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 TOM1L1O75674 476 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 KRT38O76015 456 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SERPINC1P01008 464 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 RHOP08100 348 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 ZDHHC11BP0C7U3 371 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 FAM200BP0CF97 657 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 STAT6P42226 847 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 BPIFB4P59827 614 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 CYP4A11Q02928 519 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 GRSF1Q12849 480 aaKnown RBP eCLIP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 IFI16Q16666 785 aaKnown RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM119Q4V9L6 283 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SLC15A3Q8IY34 581 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 CPXM2Q8N436 756 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 WFIKKN2Q8TEU8 576 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 CAVIN3Q969G5 261 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 SEC16BQ96JE7 1060 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 IFT74Q96LB3 600 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 GCNAQ96QF7 691 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 ADAM33Q9BZ11 813 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 PRORYQ9H606 182 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM9BQ9NQ34 198 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 PAIP2BQ9ULR5 123 aaKnown RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 PIN4Q9Y237 131 aaKnown RBP7.69□□□□□ -1.18
ZNF540-202ENST00000343599 FRMD4BQ9Y2L6 1034 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 CYP46A1Q9Y6A2 500 aa7.69□□□□□ -1.18
ZNF540-202ENST00000343599 PTPRJQ12913 1337 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 A0A087WZ62 844 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 GMNCA6NCL1 334 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 GAP43P17677 238 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 ARF4P18085 180 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 WARSP23381 471 aaKnown RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 P2RY2P41231 377 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PSMD7P51665 324 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SNAP25P60880 206 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 CLDN10P78369 228 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PPM1JQ5JR12 505 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 STPG1Q5TH74 334 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SPECC1LQ69YQ0 1117 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 NCAPH2Q6IBW4 605 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 IQCEQ6IPM2 695 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TYW1BQ6NUM6 668 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 FAM171BQ6P995 826 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 OLFML1Q6UWY5 402 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TMPRSS12Q86WS5 348 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TRIM50Q86XT4 487 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PGBD3Q8N328 593 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 NECAB1Q8N987 351 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 NSUN7Q8NE18 718 aaKnown RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM159Q96B96 161 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SYT15Q9BQS2 421 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 FDXACB1Q9BRP7 624 aaPredicted RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 FAM167BQ9BTA0 163 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 DPH1Q9BZG8 443 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 LUC7LQ9NQ29 371 aaKnown RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PANK4Q9NVE7 773 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 A0A1W2PQ27 194 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 A0A1W2PQ64 194 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 E7EVH7 732 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 GABRDO14764 452 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PRMT3O60678 531 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 NR1D1P20393 614 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 STIP1P31948 543 aaKnown RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 CTHP32929 405 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 LHX1P48742 406 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 ATP1A2P50993 1020 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 OVGP1Q12889 678 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PPP1R7Q15435 360 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TMEM259Q4ZIN3 620 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 OR52E8Q6IFG1 317 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SYT12Q8IV01 421 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 BPIFB1Q8TDL5 484 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 PRPF31Q8WWY3 499 aaKnown RBP7.68□□□□□ -1.18
ZNF540-202ENST00000343599 RILPL2Q969X0 211 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 OSBPL2Q9H1P3 480 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 IGFLR1Q9H665 355 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 CTNNAL1Q9UBT7 734 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SEPT3Q9UH03 358 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 ITGA11Q9UKX5 1188 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 SLC6A14Q9UN76 642 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 NUP205Q92621 2012 aa7.68□□□□□ -1.18
ZNF540-202ENST00000343599 TTC26A0AVF1 554 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TMX2-CTNND1H3BSU7 103 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 HSF2BPO75031 334 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TADA2AO75478 443 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 F11P03951 625 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CPA1P15085 419 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 ALOX15P16050 662 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 SP100P23497 879 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 TNFRSF8P28908 595 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 PDIA3P30101 505 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 OXCT1P55809 520 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 NLRP5P59047 1200 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 RACK1P63244 317 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 MYL5Q02045 173 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 CACNB1Q02641 598 aaPredicted RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 RNASELQ05823 741 aaKnown RBP7.67□□□□□ -1.18
ZNF540-202ENST00000343599 MTF1Q14872 753 aa7.67□□□□□ -1.18
ZNF540-202ENST00000343599 SV2CQ496J9 727 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms