RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 STK32AQ8WU08 396 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 SAR1AQ9NR31 198 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 USP12O75317 370 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SUPT7LO94864 414 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SERPINE1P05121 402 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SERPINB8P50452 374 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CES3Q6UWW8 571 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ABHD15Q6UXT9 468 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CHSY1Q86X52 802 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 PCYOX1LQ8NBM8 494 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 STKLD1Q8NE28 680 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TEKT4Q8WW24 435 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TMEM109Q9BVC6 243 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 XPNPEP1Q9NQW7 623 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 RNF19AQ9NV58 838 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SOX13Q9UN79 622 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TIMM13Q9Y5L4 95 aaPredicted RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 YDJCA8MPS7 323 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 KRT16P08779 473 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 STX5Q13190 355 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 PDAP1Q13442 181 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 PTPN20Q4JDL3 420 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 NPNTQ6UXI9 565 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 KIAA0319LQ8IZA0 1049 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 EFHBQ8N7U6 833 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.41□□□□□ -1.22
VCAN-202ENST00000342785 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 RNF157Q96PX1 679 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TBC1D10AQ9BXI6 508 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 OSBPL7Q9BZF2 842 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 UBXN6Q9BZV1 441 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CCDC134Q9H6E4 229 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ADARB2Q9NS39 739 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 WDR27A2RRH5 827 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 RNF103O00237 685 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 AKAP10O43572 662 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 NDUFS3O75489 264 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ITGAVP06756 1048 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 STMN1P16949 149 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TPH1P17752 444 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 YY1P25490 414 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 GRIK4Q16099 956 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 AMIGO3Q86WK7 504 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 INPP5DQ92835 1189 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ACO2Q99798 780 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 EFCAB1Q9HAE3 211 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 RNPEPL1Q9HAU8 725 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 MRGBPQ9NV56 204 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 THAP1Q9NVV9 213 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 COQ4Q9Y3A0 265 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 AKAP12Q02952 1782 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 A0A1W2PPM1 405 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TRIM13O60858 407 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 FBXO21O94952 628 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 MGAT1P26572 445 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SERPINB5P36952 375 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CDK16Q00536 496 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CPNE8Q86YQ8 564 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 DCP1BQ8IZD4 617 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 BEGAINQ9BUH8 593 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 FAM53CQ9NYF3 392 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 GRHL1Q9NZI5 618 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 WRAP73Q9P2S5 460 aaPredicted RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 MAGEA13PA6NCF6 341 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TADA2AO75478 443 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ETFBP38117 255 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 MLH1P40692 756 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 GEMP55040 296 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 MAP3K7CLP57077 242 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SATB1Q01826 763 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ADIGQ0VDE8 80 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 BST1Q10588 318 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TMED1Q13445 227 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CRELD2Q6UXH1 353 aaPredicted RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 MIB1Q86YT6 1006 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 RIOX2Q8IUF8 465 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ZDHHC17Q8IUH5 632 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 SHCBP1Q8NEM2 672 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 EDEM1Q92611 657 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 TLCD1Q96CP7 247 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 ASIC4Q96FT7 647 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 CELF6Q96J87 481 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 LRRC4CQ9HCJ2 640 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 NDFIP2Q9NV92 336 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 DTNAQ9Y4J8 743 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 UMODL1Q5DID0 1318 aa7.41□□□□□ -1.22
VCAN-202ENST00000342785 FAM208AQ9UK61 1670 aaKnown RBP7.41□□□□□ -1.22
VCAN-202ENST00000342785 TPST1O60507 370 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 EDF1O60869 148 aaKnown RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 CST3P01034 146 aaPredicted RBP7.4□□□□□ -1.22
VCAN-202ENST00000342785 GJB1P08034 283 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 CHRNB2P17787 502 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 ADSSP30520 456 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SOX11P35716 441 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 PEX5P50542 639 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 NCALDP61601 193 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 IMPG1Q17R60 797 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 SEL1L3Q68CR1 1132 aa7.4□□□□□ -1.22
VCAN-202ENST00000342785 UNC45BQ8IWX7 931 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms