RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 POU5F1BQ06416 359 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 RNF220Q5VTB9 566 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 TEX9Q8N6V9 391 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 FBXO27Q8NI29 283 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 CAB39LQ9H9S4 337 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 RNPEPL1Q9HAU8 725 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 SENP1Q9P0U3 644 aa13□□□□□ -0.33
LMX1A-202ENST00000342310 TRUB2O95900 331 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ITGA9Q13797 1035 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ZNF268Q14587 947 aaPredicted RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 OASLQ15646 514 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 UCMAQ8WVF2 138 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 WDR60Q8WVS4 1066 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 TEKT4Q8WW24 435 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ZNF669Q96BR6 464 aaPredicted RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 MTBPQ96DY7 904 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 VCPIP1Q96JH7 1222 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 RNF181Q9P0P0 153 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 STOML1Q9UBI4 398 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 MAFBQ9Y5Q3 323 aaPredicted RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 LAMA2P24043 3122 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 MAFO75444 373 aaPredicted RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 METTL18O95568 372 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 HSPA4LO95757 839 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 MYCP01106 439 aaPredicted RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 GM2AP17900 193 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 GCAP28676 217 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 PTPN4P29074 926 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SULT1E1P49888 294 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SLC8A3P57103 927 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 USP4Q13107 963 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SPDYCQ5MJ68 293 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 RINLQ6ZS11 566 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 BBS12Q6ZW61 710 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SLC26A11Q86WA9 606 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 TP53INP2Q8IXH6 220 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SIX6OS1Q8N1H7 587 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 REPS2Q8NFH8 660 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SLC2A14Q8TDB8 520 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 UTP4Q969X6 686 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 CNPY3Q9BT09 278 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 TMEM109Q9BVC6 243 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ACSS3Q9H6R3 686 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ETNK2Q9NVF9 386 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 TUBGCP4Q9UGJ1 667 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SPDYE5A6NIY4 337 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 GOLGA8CPA6NN73 597 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 PRR5-ARHGAP8B1AHC4 643 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 MAP3K7O43318 606 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ETS2P15036 469 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 CALB2P22676 271 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SERPINB5P36952 375 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ARHGAP8P85298 464 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 ZNF618Q5T7W0 954 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 WDR75Q8IWA0 830 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SNX31Q8N9S9 440 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 NLGN2Q8NFZ4 835 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 STK32AQ8WU08 396 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 FERMT1Q9BQL6 677 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 CADM1Q9BY67 442 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SMARCAD1Q9H4L7 1026 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 SIX4Q9UIU6 781 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 AP4E1Q9UPM8 1137 aa12.99□□□□□ -0.33
LMX1A-202ENST00000342310 APOBEC2Q9Y235 224 aaKnown RBP12.99□□□□□ -0.33
LMX1A-202ENST00000342310 DPPA5A6NC42 116 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 M0QYT0 321 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 ITGAVP06756 1048 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 CSH1P0DML2 217 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 CSH2P0DML3 217 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 RBP5P82980 135 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 PTP4A2Q12974 167 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 N4BP2L1Q5TBK1 243 aaPredicted RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 FKBP1CQ5VVH2 108 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 SLC7A14Q8TBB6 771 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 SCG3Q8WXD2 468 aaKnown RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 CDKL2Q92772 493 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 OXNAD1Q96HP4 312 aaPredicted RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 FAM167AQ96KS9 214 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 TSNARE1Q96NA8 513 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 C2orf40Q9H1Z8 148 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 ARHGEF3Q9NR81 526 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 IRAK4Q9NWZ3 460 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 CPSF3Q9UKF6 684 aaKnown RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 STARD13Q9Y3M8 1113 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 MYH9P35579 1960 aaKnown RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 PAPSS1O43252 624 aaPredicted RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 CSPG5O95196 566 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 STBD1O95210 358 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 LMO2P25791 158 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 DLG2Q15700 870 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 PTAR1Q7Z6K3 402 aaPredicted RBP12.98□□□□□ -0.33
LMX1A-202ENST00000342310 RASSF3Q86WH2 238 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 ERAP1Q9NZ08 941 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 SLC24A2Q9UI40 661 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 PLA2G4CQ9UP65 541 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 SNX10Q9Y5X0 201 aa12.98□□□□□ -0.33
LMX1A-202ENST00000342310 SRRM3A6NNA2 597 aaPredicted RBP12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PLA2G6O60733 806 aa12.97□□□□□ -0.33
LMX1A-202ENST00000342310 PITX1P78337 314 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms