RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FUCA2Q9BTY2 467 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 LRRC4Q9HBW1 653 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 DNAJC12Q9UKB3 198 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 CDV3Q9UKY7 258 aaKnown RBP16.17■□□□□ 0.18
VAPA-201ENST00000340541 USP18Q9UMW8 372 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 MYOFQ9NZM1 2061 aa16.17■□□□□ 0.18
VAPA-201ENST00000340541 CCDC163A0A0D9SF12 145 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 E2F8A0AVK6 867 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 MDM4O15151 490 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 HRO43593 1189 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 GJA4P35212 333 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 GPD2P43304 727 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 RPL34P49207 117 aaKnown RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 RGS7P49802 495 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 SIM2Q14190 667 aaPredicted RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 PON2Q15165 354 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 ANO6Q4KMQ2 910 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 KLHDC7AQ5VTJ3 777 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 NAIF1Q69YI7 327 aaPredicted RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 DENND1BQ6P3S1 775 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 APTXQ7Z2E3 356 aaKnown RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 ADGRG2Q8IZP9 1017 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 SCML4Q8N228 414 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 CPA6Q8N4T0 437 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 ZNF606Q8WXB4 792 aa16.16■□□□□ 0.18
VAPA-201ENST00000340541 NAA15Q9BXJ9 866 aaKnown RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 LIMA1Q9UHB6 759 aaKnown RBP16.16■□□□□ 0.18
VAPA-201ENST00000340541 CHURC1-FNTBB4DL54 471 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 FOXN3O00409 490 aaPredicted RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 TRDMT1O14717 391 aaKnown RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 ATG13O75143 517 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 CYP17A1P05093 508 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 PNMA6AP0CW24 399 aaPredicted RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 GNA15P30679 374 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 FNTBP49356 437 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 YWHAGP61981 247 aaKnown RBP eCLIP16.15■□□□□ 0.18
VAPA-201ENST00000340541 MEA1Q16626 185 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 TMEM196Q5HYL7 178 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 WDR5BQ86VZ2 330 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 ARHGAP18Q8N392 663 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 EXOC4Q96A65 974 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 HSFY1Q96LI6 401 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 NACA2Q9H009 215 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 VPS16Q9H269 839 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 FBRSL1Q9HCM7 1045 aaKnown RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 PARD6AQ9NPB6 346 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 CNGB3Q9NQW8 809 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 RBM12Q9NTZ6 932 aaKnown RBP16.15■□□□□ 0.18
VAPA-201ENST00000340541 CYTH4Q9UIA0 394 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 FHOD1Q9Y613 1164 aa16.15■□□□□ 0.18
VAPA-201ENST00000340541 LRRC10BA6NIK2 292 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 YJEFN3A6XGL0 299 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 E7ENQ6 273 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 PES1O00541 588 aaKnown RBP16.14■□□□□ 0.17
VAPA-201ENST00000340541 SLC9A3R1O14745 358 aaPredicted RBP16.14■□□□□ 0.17
VAPA-201ENST00000340541 NFATC1O95644 943 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 IRF1P10914 325 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 RALAP11233 206 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 LCP1P13796 627 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 CLCN1P35523 988 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 USP8P40818 1118 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 KLK7P49862 253 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 COPB1P53618 953 aaKnown RBP16.14■□□□□ 0.17
VAPA-201ENST00000340541 DAOAP59103 153 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
VAPA-201ENST00000340541 CSRP2Q16527 193 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 C10orf120Q5SQS8 335 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 FSTL4Q6MZW2 842 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 RHBDF2Q6PJF5 856 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 PRR23BQ6ZRT6 265 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 HTR3DQ70Z44 454 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 BBS7Q8IWZ6 715 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 FAM71AQ8IYT1 594 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 SIX6OS1Q8N1H7 587 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 AOPEPQ8N6M6 819 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 NETO1Q8TDF5 533 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 BPIFA3Q9BQP9 254 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 LSM14BQ9BX40 385 aaKnown RBP16.14■□□□□ 0.17
VAPA-201ENST00000340541 PLCB1Q9NQ66 1216 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 TBC1D14Q9P2M4 693 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 DNMT3LQ9UJW3 386 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 SH3BP1Q9Y3L3 701 aa16.14■□□□□ 0.17
VAPA-201ENST00000340541 PIK3R2O00459 728 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 THAP12O43422 761 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 UCHL3P15374 230 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 OPRD1P41143 372 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 GALK1P51570 392 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 SPEM2Q0P670 501 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 DRAP1Q14919 205 aaPredicted RBP16.13■□□□□ 0.17
VAPA-201ENST00000340541 DHCR24Q15392 516 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 BSPRYQ5W0U4 402 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 Q6ZS52 159 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
VAPA-201ENST00000340541 CLEC4CQ8WTT0 213 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 STK32AQ8WU08 396 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 EZH1Q92800 747 aaPredicted RBP16.13■□□□□ 0.17
VAPA-201ENST00000340541 OTUB2Q96DC9 234 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 LOXL4Q96JB6 756 aa16.13■□□□□ 0.17
VAPA-201ENST00000340541 CDK5RAP1Q96SZ6 601 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms