RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 TRIM65Q6PJ69 517 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 GBP6Q6ZN66 633 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 RSRC2Q7L4I2 434 aaKnown RBP13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 RRAGAQ7L523 313 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 WDR5BQ86VZ2 330 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 GPR161Q8N6U8 529 aaKnown RBP13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 RPLP0P6Q8NHW5 317 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 KCNV2Q8TDN2 545 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 SLC35F5Q8WV83 523 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 IRGQQ8WZA9 623 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 HSFY1Q96LI6 401 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 MARK1Q9P0L2 795 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 SMG5Q9UPR3 1016 aaKnown RBP13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 ZNF292O60281 2723 aa13.99□□□□□ -0.17
SIRPB3P-201ENST00000340424 K7EQS6 105 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MED7O43513 233 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 FBXO21O94952 628 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 KAT7O95251 611 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 CHKAP35790 457 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 TNFRSF4P43489 277 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MTIF2P46199 727 aaKnown RBP13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 ADIGQ0VDE8 80 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MAN2A1Q16706 1144 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 EXOC3L4Q17RC7 722 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 DPCR1Q3MIW9 517 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 NAIF1Q69YI7 327 aaPredicted RBP13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MIB1Q86YT6 1006 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 IRF2BP1Q8IU81 584 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 CREBRFQ8IUR6 639 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 ARHGEF19Q8IW93 802 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 ETFBKMTQ8IXQ9 262 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 TFAP2BQ92481 460 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 KREMEN1Q96MU8 473 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 XPO6Q96QU8 1125 aaKnown RBP13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MED15Q96RN5 788 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 HINFPQ9BQA5 517 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 ULBP1Q9BZM6 244 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 ARHGEF4Q9NR80 690 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 MARCH2Q9P0N8 246 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 DEC1Q9P2X7 70 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 APEX2Q9UBZ4 518 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 KIAA1549LQ6ZVL6 1849 aa13.98□□□□□ -0.17
SIRPB3P-201ENST00000340424 M0QYV0 167 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 RNF225M0QZC1 329 aaPredicted RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 TULP2O00295 520 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 SCAMP3O14828 347 aaKnown RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 SART1O43290 800 aaKnown RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 CACNG3O60359 315 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 STC2O76061 302 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 APBB3O95704 486 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 KRT5P13647 590 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 FNTBP49356 437 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 EFEMP1Q12805 493 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 DMC1Q14565 340 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 ANO4Q32M45 955 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 LAIR1Q6GTX8 287 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 PKN3Q6P5Z2 889 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 Q6ZNB5 142 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 TRMT11Q7Z4G4 463 aaKnown RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 UBA3Q8TBC4 463 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 USP33Q8TEY7 942 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 EZH1Q92800 747 aaPredicted RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 GOLGA1Q92805 767 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 KAT5Q92993 513 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 PLD4Q96BZ4 506 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 TRIM62Q9BVG3 475 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 UBE2TQ9NPD8 197 aaPredicted RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 ABCC13Q9NSE7 274 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 C2orf42Q9NWW7 574 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 NCDNQ9UBB6 729 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 EBF1Q9UH73 591 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 RASAL2Q9UJF2 1139 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 GMEB2Q9UKD1 530 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
SIRPB3P-201ENST00000340424 PTPRZ1P23471 2315 aaPredicted RBP13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 OTOGLQ3ZCN5 2332 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 MDM4O15151 490 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 TULP3O75386 442 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 BRD2P25440 801 aaKnown RBP13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 ACADSBP45954 432 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 DGKEP52429 567 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 DAOAP59103 153 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 ZNF445P59923 1031 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 SIM2Q14190 667 aaPredicted RBP13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 PPP1R15BQ5SWA1 713 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 BSPRYQ5W0U4 402 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 RBM43Q6ZSC3 357 aaKnown RBP13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 BHLHA9Q7RTU4 235 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 C12orf40Q86WS4 652 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 TMEM25Q86YD3 366 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 PHTF2Q8N3S3 785 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 TERB1Q8NA31 727 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 STK32AQ8WU08 396 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 BBS2Q9BXC9 721 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 NUDT5Q9UKK9 219 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 MMP17Q9ULZ9 603 aa13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 HBS1LQ9Y450 684 aaKnown RBP13.96□□□□□ -0.17
SIRPB3P-201ENST00000340424 TBC1D3BA6NDS4 549 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms