RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 HTR3DQ70Z44 454 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 RABEPKQ7Z6M1 372 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 CHPFQ8IZ52 775 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 HDDC3Q8N4P3 179 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 DEFB119Q8N690 84 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 ZMIZ2Q8NF64 920 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 XPO6Q96QU8 1125 aaKnown RBP16.51■□□□□ 0.23
LINC01116-202ENST00000339037 SMOQ99835 787 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 GTPBP2Q9BX10 602 aaKnown RBP16.51■□□□□ 0.23
LINC01116-202ENST00000339037 BBS2Q9BXC9 721 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 CSNK1G1Q9HCP0 422 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 FAM49BQ9NUQ9 324 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 HMGXB4Q9UGU5 601 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 HCN2Q9UL51 889 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 SLC6A14Q9UN76 642 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 PCNX2A6NKB5 2137 aa16.51■□□□□ 0.23
LINC01116-202ENST00000339037 BAHCC1Q9P281 2608 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 TNRC6BQ9UPQ9 1833 aaKnown RBP16.5■□□□□ 0.23
LINC01116-202ENST00000339037 CACNG3O60359 315 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 ZNF217O75362 1048 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 C4BPAP04003 597 aaKnown RBP16.5■□□□□ 0.23
LINC01116-202ENST00000339037 SERPINF2P08697 491 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 FAM200BP0CF97 657 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 TYRP14679 529 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 TRIM21P19474 475 aaKnown RBP16.5■□□□□ 0.23
LINC01116-202ENST00000339037 ME1P48163 572 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 NDST1P52848 882 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 SIM1P81133 766 aaPredicted RBP16.5■□□□□ 0.23
LINC01116-202ENST00000339037 ZNF33AQ06730 810 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 SEMA3BQ13214 749 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 SGSM1Q2NKQ1 1148 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 PIP4P1Q86T03 277 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 C12orf29Q8N999 325 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 GATA6Q92908 595 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 CAPN10Q9HC96 672 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 CYLDQ9NQC7 956 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 FSCN3Q9NQT6 498 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 WDR35Q9P2L0 1181 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 LSM7Q9UK45 103 aaKnown RBP16.5■□□□□ 0.23
LINC01116-202ENST00000339037 PCDHA7Q9UN72 937 aa16.5■□□□□ 0.23
LINC01116-202ENST00000339037 LOC400499M0QZD8 3231 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 IGHV1OR15-9A0A0B4J2B8 117 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 SPAARA0A1B0GVQ0 90 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 UPK3BL1B0FP48 263 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 UPK3BL2E5RIL1 263 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 CYP26A1O43174 497 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 HYAL3O43820 417 aaPredicted RBP16.49■□□□□ 0.23
LINC01116-202ENST00000339037 GREM1O60565 184 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 RPN1P04843 607 aaKnown RBP16.49■□□□□ 0.23
LINC01116-202ENST00000339037 NDUFV2P19404 249 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 ATP5C1P36542 298 aaKnown RBP16.49■□□□□ 0.23
LINC01116-202ENST00000339037 DLG4P78352 724 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 DNM1Q05193 864 aaKnown RBP16.49■□□□□ 0.23
LINC01116-202ENST00000339037 ZACNQ401N2 412 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 TPGS1Q6ZTW0 290 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 UNC93AQ86WB7 457 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 SLC9A9Q8IVB4 645 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 GRAMD1CQ8IYS0 662 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 CEP57L1Q8IYX8 460 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 CRYBG2Q8N1P7 616 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 TAF4BQ92750 862 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 ACOX2Q99424 681 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 KLF16Q9BXK1 252 aaPredicted RBP16.49■□□□□ 0.23
LINC01116-202ENST00000339037 EXOC1Q9NV70 894 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 MARK1Q9P0L2 795 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 SCML2Q9UQR0 700 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 NEUROG3Q9Y4Z2 214 aa16.49■□□□□ 0.23
LINC01116-202ENST00000339037 PRRT4C9JH25 899 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 OPHN1O60890 802 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 ASS1P00966 412 aaKnown RBP16.48■□□□□ 0.23
LINC01116-202ENST00000339037 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
LINC01116-202ENST00000339037 ADORA2BP29275 332 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 ASPAP45381 313 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 STK4Q13043 487 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 RESP18Q5W5W9 173 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 GPRIN1Q7Z2K8 1008 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 MINDY1Q8N5J2 469 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 KIAA0895Q8NCT3 520 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 IPO4Q8TEX9 1081 aaKnown RBP16.48■□□□□ 0.23
LINC01116-202ENST00000339037 TMEM174Q8WUU8 243 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 JAKMIP2Q96AA8 810 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 ERLEC1Q96DZ1 483 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 HSPA12BQ96MM6 686 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 GABRG3Q99928 467 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 CD248Q9HCU0 757 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.48■□□□□ 0.23
LINC01116-202ENST00000339037 DMAC2Q9NW81 257 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 OSER1Q9NX31 292 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 CYP8B1Q9UNU6 501 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 CELSR3Q9NYQ7 3312 aa16.48■□□□□ 0.23
LINC01116-202ENST00000339037 ARHGAP33O14559 1287 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 NR3C1P04150 777 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 ACO1P21399 889 aaKnown RBP16.47■□□□□ 0.23
LINC01116-202ENST00000339037 PIK3CAP42336 1068 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 DGKGP49619 791 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 SPOPLQ6IQ16 392 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 CLEC20AQ6ZU45 233 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 TOGARAM2Q6ZUX3 1019 aa16.47■□□□□ 0.23
LINC01116-202ENST00000339037 SV2AQ7L0J3 742 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms