RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 GBP1P32455 592 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 NOS2P35228 1153 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 PTP4A2Q12974 167 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TDGQ13569 410 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TAF5Q15542 800 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC18A3Q16572 532 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 C2CD6Q53TS8 623 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 DCAF6Q58WW2 860 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 ARCQ7LC44 396 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 PHLDB2Q86SQ0 1253 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 MIB1Q86YT6 1006 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 CCDC170Q8IYT3 715 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 DEFB106AQ8N104 65 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 KIAA1958Q8N8K9 716 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TTC16Q8NEE8 873 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 BPIFB1Q8TDL5 484 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SH3RF2Q8TEC5 729 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 FGF14Q92915 247 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 UHRF1Q96T88 793 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 KXD1Q9BQD3 176 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SELENOOQ9BVL4 669 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TRMT61BQ9BVS5 477 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 DCLK3Q9C098 648 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 GKN1Q9NS71 199 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SMPD4Q9NXE4 827 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 TAS2R14Q9NYV8 317 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 LSM7Q9UK45 103 aaKnown RBP12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 NAALADL1Q9UQQ1 740 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
SPTLC1-202ENST00000337841 SIGLEC16A6NMB1 481 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 LEFTY2O00292 366 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC9A3R1O14745 358 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 ZNF263O14978 683 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 GRAP2O75791 330 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 PRAMEF12O95522 483 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 FYNP06241 537 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 ASGR2P07307 311 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 FCARP24071 287 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 CYLC1P35663 651 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 MATKP42679 507 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 ARHGAP29Q52LW3 1261 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 MSANTD2Q6P1R3 559 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 DNAJC24Q6P3W2 148 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 MON1BQ7L1V2 547 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 ST13P5Q8NFI4 369 aaPredicted RBP12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 RSAD2Q8WXG1 361 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 KHSRPQ92945 711 aaKnown RBP eCLIP12.44□□□□□ -0.422e-7■□□□□ 10.5
SPTLC1-202ENST00000337841 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 RPP25Q9BUL9 199 aaKnown RBP12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 PLA2G2FQ9BZM2 168 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 SFMBT1Q9UHJ3 866 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 STAP1Q9ULZ2 295 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 CCL26Q9Y258 94 aa12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 HBS1LQ9Y450 684 aaKnown RBP12.44□□□□□ -0.42
SPTLC1-202ENST00000337841 E2F8A0AVK6 867 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 MDM4O15151 490 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 DAB1O75553 588 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 F9P00740 461 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 H2AFZP0C0S5 128 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 DESP17661 470 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 RRM1P23921 792 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 GDI1P31150 447 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 GSCP56915 257 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 GPC5P78333 572 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 GFPT1Q06210 699 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 SPA17Q15506 151 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 ASTE1Q2TB18 679 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 C10orf76Q5T2E6 689 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 SYPL2Q5VXT5 272 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 DCUN1D2Q6PH85 259 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 VITQ6UXI7 678 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 HTR3DQ70Z44 454 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 H2AFVQ71UI9 128 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 UNC45BQ8IWX7 931 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 OLIG1Q8TAK6 271 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 DQX1Q8TE96 717 aaKnown RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 IRF7Q92985 503 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 NECAB3Q96P71 396 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 BAG1Q99933 345 aaPredicted RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 DDX23Q9BUQ8 820 aaKnown RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 BRD9Q9H8M2 597 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 LUC7LQ9NQ29 371 aaKnown RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 TBC1D14Q9P2M4 693 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 CNOT8Q9UFF9 292 aaKnown RBP12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 SLC12A6Q9UHW9 1150 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 TMEM59LQ9UK28 342 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 SORCS3Q9UPU3 1222 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 ZNF510Q9Y2H8 683 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 PTPRDP23468 1912 aa12.43□□□□□ -0.42
SPTLC1-202ENST00000337841 CHADO15335 359 aa12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 IPO7O95373 1038 aaKnown RBP12.42□□□□□ -0.42
SPTLC1-202ENST00000337841 TRUB2O95900 331 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms