RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SNRNP25Q9BV90 132 aaKnown RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 DPEP3Q9H4B8 488 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 CAB39LQ9H9S4 337 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 PCDH9Q9HC56 1237 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 CPA4Q9UI42 421 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 CHKBQ9Y259 395 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 MFHAS1Q9Y4C4 1052 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 ATAD5Q96QE3 1844 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 ACKR2O00590 384 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 FCHO1O14526 889 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 KIF3CO14782 793 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 HBP1O60381 514 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 GPC4O75487 556 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 ENDOD1O94919 500 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 MUTP22033 750 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 CDKN2BP42772 138 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 IGDCC3Q8IVU1 814 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 BEST2Q8NFU1 509 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 GSDMBQ8TAX9 411 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 PABPC5Q96DU9 382 aaKnown RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 MTBPQ96DY7 904 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 PRR11Q96HE9 360 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 NXF3Q9H4D5 531 aaKnown RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 AVENQ9NQS1 362 aaPredicted RBP8.52□□□□□ -1.05
HPS4-201ENST00000336873 ANLNQ9NQW6 1124 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 ARL8BQ9NVJ2 186 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 SNX10Q9Y5X0 201 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 TAF1LQ8IZX4 1826 aa8.52□□□□□ -1.05
HPS4-201ENST00000336873 M0QZ92 97 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 PHGDHO43175 533 aaKnown RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 PAPSS1O43252 624 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 MAP3K7O43318 606 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 JCHAINP01591 159 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 DEUP1Q05D60 604 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 BST1Q10588 318 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 POU6F1Q14863 301 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 MFSD4BQ5TF39 518 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 PLEKHA7Q6IQ23 1121 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 SYDE1Q6ZW31 735 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 ARMCX2Q7L311 632 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 COLGALT1Q8NBJ5 622 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 DNAJC9Q8WXX5 260 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 SEC14L1Q92503 715 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 NMUR2Q9GZQ4 415 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 C20orf96Q9NUD7 363 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 ADA2Q9NZK5 511 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 FAM8A1Q9UBU6 413 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 TUBGCP4Q9UGJ1 667 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 PLA2G4CQ9UP65 541 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 SLC26A4O43511 780 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 CCDC22O60826 627 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 ZC3H11AO75152 810 aaKnown RBP eCLIP8.51□□□□□ -1.05
HPS4-201ENST00000336873 CRCPO75575 148 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 RASSF9O75901 435 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 B3GAT3O94766 335 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 UNC5CO95185 931 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 POMCP01189 267 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 ATP6V1B1P15313 513 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 LMO2P25791 158 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 RFC5P40937 340 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 GSCP56915 257 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 USP4Q13107 963 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 FBXO48Q5FWF7 155 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 DEFB106AQ8N104 65 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 MPP5Q8N3R9 675 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 APPL2Q8NEU8 664 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 PTPRN2Q92932 1015 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 LPPQ93052 612 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 SERAC1Q96JX3 654 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 OMDQ99983 421 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 CNPY3Q9BT09 278 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 TASP1Q9H6P5 420 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 DHX33Q9H6R0 707 aaKnown RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 SARS2Q9NP81 518 aaKnown RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 CHST12Q9NRB3 414 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 SBF2Q86WG5 1849 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 CXorf49A8MYA2 514 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 DCXO43602 365 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 GRIN3BO60391 1043 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 CCND1P24385 295 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 ADORA2AP29274 412 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 NDUFV1P49821 464 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 RPS6KA2Q15349 733 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 TMEM259Q4ZIN3 620 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 ZNF618Q5T7W0 954 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 N4BP2L1Q5TBK1 243 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 CHST13Q8NET6 341 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 HDAC11Q96DB2 347 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 NAF1Q96HR8 494 aaKnown RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 NSL1Q96IY1 281 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 PRMT7Q9NVM4 692 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 BFARQ9NZS9 450 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 STOML1Q9UBI4 398 aa8.51□□□□□ -1.05
HPS4-201ENST00000336873 NKX1-2Q9UD57 310 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 PRG3Q9Y2Y8 225 aaPredicted RBP8.51□□□□□ -1.05
HPS4-201ENST00000336873 NVLO15381 856 aaKnown RBP8.5□□□□□ -1.05
HPS4-201ENST00000336873 TPI1P60174 286 aa8.5□□□□□ -1.05
HPS4-201ENST00000336873 CCNA1P78396 465 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms