RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PYROXD1Q8WU10 500 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 NKD2Q969F2 451 aaPredicted RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 ITFG2Q969R8 447 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 SYT15Q9BQS2 421 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 SLC17A6Q9P2U8 582 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 CDH23Q9H251 3354 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 RASA4BC9J798 803 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 RASA4O43374 803 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 ITGAVP06756 1048 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 PGFP49763 221 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 GATMP50440 423 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 YWHAGP61981 247 aaKnown RBP eCLIP13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SPARCL1Q14515 664 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 C3orf62Q6ZUJ4 267 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 CCNYQ8ND76 341 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SCAMP5Q8TAC9 235 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SENP6Q9GZR1 1112 aaPredicted RBP13.08□□□□□ -0.32
LIMK1-201ENST00000336180 RSAD1Q9HA92 442 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 PCDH9Q9HC56 1237 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 CLUHO75153 1309 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 MYO1CO00159 1063 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SEPT4O43236 478 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 KCNE1P15382 129 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 GCAP28676 217 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 ARPP19P56211 112 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 GJA9P57773 515 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 VSTM1Q6UX27 236 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SRLQ86TD4 932 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 NT5DC4Q86YG4 428 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 UNC5BQ8IZJ1 945 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 AGGF1Q8N302 714 aaeCLIP13.08□□□□□ -0.32
LIMK1-201ENST00000336180 SMOQ99835 787 aa13.08□□□□□ -0.32
LIMK1-201ENST00000336180 E2F8A0AVK6 867 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 I6L893 689 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ADAMTS4O75173 837 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 NCAM1P13591 858 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 L1CAMP32004 1257 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ELK3P41970 407 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 COPS2P61201 443 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 DENND5BQ6ZUT9 1274 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 SYDE1Q6ZW31 735 aaPredicted RBP13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ZNF280BQ86YH2 543 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 FBF1Q8TES7 1133 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 PIGVQ9NUD9 493 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
LIMK1-201ENST00000336180 KCNK1O00180 336 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 SOAT2O75908 522 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 METTL18O95568 372 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 GBP1P32455 592 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 LPIN1Q14693 890 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ERMARDQ5T6L9 678 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 KCNT2Q6UVM3 1135 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 MICALCLQ6ZW33 695 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 PALM2Q8IXS6 379 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 MPP5Q8N3R9 675 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 PGM2Q96G03 612 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 AGAP3Q96P47 875 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 MTMR10Q9NXD2 777 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 DDX20Q9UHI6 824 aaKnown RBP13.07□□□□□ -0.32
LIMK1-201ENST00000336180 KIAA1257Q9ULG3 409 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 DERAQ9Y315 318 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 MAD1L1Q9Y6D9 718 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 TCP11X1B4DZS4 312 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 TRAPPC3O43617 180 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 UGT1A9O60656 530 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 NPR3P17342 541 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 AXLP30530 894 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 PCK1P35558 622 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 LMNB2Q03252 620 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ITGA7Q13683 1181 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 NOMO1Q15155 1222 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 CES3Q6UWW8 571 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 CENPUQ71F23 418 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 RSPH3Q86UC2 560 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 SERINC5Q86VE9 423 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 CRYBG2Q8N1P7 616 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 ATXN2LQ8WWM7 1075 aaKnown RBP13.07□□□□□ -0.32
LIMK1-201ENST00000336180 TNIP3Q96KP6 325 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 SIK2Q9H0K1 926 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 NRDE2Q9H7Z3 1164 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 UGT1A7Q9HAW7 530 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 UGT1A10Q9HAW8 530 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 UGT1A8Q9HAW9 530 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 FGFR1OP2Q9NVK5 253 aa13.07□□□□□ -0.32
LIMK1-201ENST00000336180 DCAF8L1A6NGE4 600 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 XPOTO43592 962 aaKnown RBP13.06□□□□□ -0.32
LIMK1-201ENST00000336180 USP12O75317 370 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 AGTP01019 485 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 MMP13P45452 471 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 AP1B1Q10567 949 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 PRPF39Q86UA1 669 aaKnown RBP13.06□□□□□ -0.32
LIMK1-201ENST00000336180 UNC93AQ86WB7 457 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 CEP57Q86XR8 500 aa13.06□□□□□ -0.32
LIMK1-201ENST00000336180 CTAGE3PQ8IX95 158 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms