RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 SLC26A11Q86WA9 606 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 SCG3Q8WXD2 468 aaKnown RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 OPTNQ96CV9 577 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 FAM161BQ96MY7 647 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 MMP19Q99542 508 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 CXCL16Q9H2A7 254 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 RNF19AQ9NV58 838 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 ASNSD1Q9NWL6 643 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PPARGC1AQ9UBK2 798 aaKnown RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 MAD1L1Q9Y6D9 718 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 CITO14578 2027 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 HMX2A2RU54 273 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 EME2A4GXA9 379 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 C2CD4BA6NLJ0 364 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 ACKR2O00590 384 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PRPSAP2O60256 369 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 RFPL1O75677 317 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 CNMDO75829 334 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PSMG1O95456 288 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 NDST1P52848 882 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PPIL2Q13356 520 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 SPDYAQ5MJ70 313 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 TTC39BQ5VTQ0 682 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC62Q6P9F0 684 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PDCD7Q8N8D1 485 aaKnown RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 PCDH19Q8TAB3 1148 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 FAM167AQ96KS9 214 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 EBF4Q9BQW3 602 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 B3GNT5Q9BYG0 378 aa12.79□□□□□ -0.36
VPS33B-201ENST00000333371 FRMD8P1Q9BZ68 369 aaPredicted RBP12.79□□□□□ -0.36
VPS33B-201ENST00000333371 DCAF8L1A6NGE4 600 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 E7ENQ6 273 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 DNAJC6O75061 913 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 ENDOD1O94919 500 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 METTL18O95568 372 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 ZBED1O96006 694 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 STAG3L1P0CL83 205 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 RARBP10826 455 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 STIP1P31948 543 aaKnown RBP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 PGM1P36871 562 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 CRADDP78560 199 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 EFCAB12Q6NXP0 572 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 TMEM154Q6P9G4 183 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 UNC5AQ6ZN44 842 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 FASTKD5Q7L8L6 764 aaKnown RBP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 KBTBD2Q8IY47 623 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 TEX9Q8N6V9 391 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 CXorf38Q8TB03 319 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 GPR20Q99678 358 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 TXNRD2Q9NNW7 524 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 WDR35Q9P2L0 1181 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 TSPAN16Q9UKR8 245 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 PLLPQ9Y342 182 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 EPHX2P34913 555 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 ALDH18A1P54886 795 aaKnown RBP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 AQP5P55064 265 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 BCAR1P56945 870 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 MXD4Q14582 209 aaPredicted RBP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 SURF1Q15526 300 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 C16orf46Q6P387 395 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 SCUBE3Q8IX30 993 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 SLC25A41Q8N5S1 370 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 RBM15BQ8NDT2 890 aaKnown RBP12.78□□□□□ -0.36
VPS33B-201ENST00000333371 CNPY3Q9BT09 278 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 FZD8Q9H461 694 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 ETNK2Q9NVF9 386 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 KCNH4Q9UQ05 1017 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 MFHAS1Q9Y4C4 1052 aa12.78□□□□□ -0.36
VPS33B-201ENST00000333371 SLC15A5A6NIM6 579 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 MEI4A8MW99 385 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 CHADO15335 359 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 PFKMP08237 780 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.36
VPS33B-201ENST00000333371 ADORA2AP29274 412 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 VHLP40337 213 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 GABRB2P47870 512 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 UBAP2LQ14157 1087 aaKnown RBP12.77□□□□□ -0.36
VPS33B-201ENST00000333371 TSNAXIP1Q2TAA8 658 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 GJC2Q5T442 439 aaPredicted RBP12.77□□□□□ -0.36
VPS33B-201ENST00000333371 LRRC74BQ6ZQY2 392 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 USP50Q70EL3 339 aaPredicted RBP12.77□□□□□ -0.36
VPS33B-201ENST00000333371 PHC3Q8NDX5 983 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 FAM172AQ8WUF8 416 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 E2F7Q96AV8 911 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 PGLYRP2Q96PD5 576 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 FAM49BQ9NUQ9 324 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 RBPJLQ9UBG7 517 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 STOML1Q9UBI4 398 aa12.77□□□□□ -0.36
VPS33B-201ENST00000333371 HCRTO43612 131 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 LYPLA1O75608 230 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-201ENST00000333371 TGDSO95455 350 aa12.77□□□□□ -0.37
VPS33B-201ENST00000333371 F7P08709 466 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-201ENST00000333371 GBE1Q04446 702 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms