RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 BANF1O75531 89 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PGK1P00558 417 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 LRG1P02750 347 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SLC2A3P11169 496 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 KDELR1P24390 212 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 MGAT1P26572 445 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 RBL1P28749 1068 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 YWHAZP63104 245 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 CENPKQ9BS16 269 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 MRPL1Q9BYD6 325 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 YIPF3Q9GZM5 350 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 LRRC40Q9H9A6 602 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 DSEQ9UL01 958 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 MANSC4A6NHS7 340 aaPredicted RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PQBP1O60828 265 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 MMRN1Q13201 1228 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 YAF2Q8IY57 180 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 NOL4O94818 638 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PTPN7P35236 360 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PKN2Q16513 984 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 HSDL1Q3SXM5 330 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 WSCD1Q658N2 575 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 KATNAL2Q8IYT4 538 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 LPPQ93052 612 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 HSD3B7Q9H2F3 369 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 BCAS3Q9H6U6 928 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 VANGL2Q9ULK5 521 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 NCANO14594 1321 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 GOLGA8TH3BQL2 631 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 PLA2G6O60733 806 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 GLRA3O75311 464 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SEC24DO94855 1032 aaPredicted RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SERPINB5P36952 375 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 RPL10AP62906 217 aaKnown RBP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 ARHGEF7Q14155 803 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 ABHD15Q6UXT9 468 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 DLK2Q6UY11 383 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.42□□□□□ -0.26
VSTM4-202ENST00000332853 SNCAIPQ9Y6H5 919 aa13.42□□□□□ -0.26
VSTM4-202ENST00000332853 TBKBP1A7MCY6 615 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 ST8SIA6P61647 398 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 TTC23LQ6PF05 361 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 NLGN2Q8NFZ4 835 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SHC3Q92529 594 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 DCDC2Q9UHG0 476 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 TNFSF13BQ9Y275 285 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 H7C4K7 107 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 KLHL2O95198 593 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 MAP4P27816 1152 aaKnown RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 TBCCQ15814 346 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 MFN1Q8IWA4 741 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 KREMEN1Q96MU8 473 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 PPP1R2P1Q96PQ5 205 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 PCDHB18PQ96TA0 734 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SCUBE2Q9NQ36 999 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 DDX20Q9UHI6 824 aaKnown RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SCTRP47872 440 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SERPINB8P50452 374 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SCNN1GP51170 649 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 DNAL1Q4LDG9 190 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 C6orf10Q5SRN2 563 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 FAM171A1Q5VUB5 890 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 PTAR1Q7Z6K3 402 aaPredicted RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 MTDHQ86UE4 582 aaKnown RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HTR3CQ8WXA8 447 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 ING2Q9H160 280 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 ATXN3LQ9H3M9 355 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 CD248Q9HCU0 757 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 CDY2AQ9Y6F7 541 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 CDY1Q9Y6F8 540 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SYNDIG1LA6NDD5 238 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 USP12O75317 370 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 PIAS1O75925 651 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HIST1H2AGP0C0S8 130 aaPredicted RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HIST1H2ADP20671 130 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SLC39A12Q504Y0 691 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 KCNT2Q6UVM3 1135 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SMARCD1Q96GM5 515 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HIST1H2AHQ96KK5 128 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HIST1H2AJQ99878 128 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 H2AFJQ9BTM1 129 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SLC13A4Q9UKG4 626 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 TRPV2Q9Y5S1 764 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 KDM3BQ7LBC6 1761 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 O00370 1275 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 ALDH2P05091 517 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 HIRAP54198 1017 aaPredicted RBP13.41□□□□□ -0.26
VSTM4-202ENST00000332853 SNX31Q8N9S9 440 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 CXorf38Q8TB03 319 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 DNAJC16Q9Y2G8 782 aa13.41□□□□□ -0.26
VSTM4-202ENST00000332853 IGLV3-22A0A075B6J6 115 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ASS1P00966 412 aaKnown RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 NME5P56597 212 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 FAM83EQ2M2I3 478 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 TIGD7Q6NT04 549 aaPredicted RBP13.4□□□□□ -0.26
VSTM4-202ENST00000332853 NETO2Q8NC67 525 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 ULBP1Q9BZM6 244 aa13.4□□□□□ -0.26
VSTM4-202ENST00000332853 RBM22Q9NW64 420 aaKnown RBP eCLIP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms