RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 JADE3Q92613 823 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 SLITRK1Q96PX8 696 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 NDUFB5O43674 189 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 SERPINA6P08185 405 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 TCF4P15884 667 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 PTPRAP18433 802 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 CPOXP36551 454 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 CCR3P51677 355 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 COPAP53621 1224 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 ACAP1Q15027 740 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 CROCCP3Q8IVE0 287 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 FBXL13Q8NEE6 735 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 C7orf26Q96N11 449 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 MRPS26Q9BYN8 205 aaKnown RBP18.79■□□□□ 0.6
PKP3-201ENST00000331563 PCDHGB4Q9UN71 923 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 PCDHGB5Q9Y5G0 923 aa18.79■□□□□ 0.6
PKP3-201ENST00000331563 CYB561D2O14569 222 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SRGAP2CP0DJJ0 459 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SRGAP2BP0DMP2 458 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SPIDRQ14159 915 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 LPIN1Q14693 890 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SYTL5Q8TDW5 730 aaPredicted RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 HESX1Q9UBX0 185 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 XPO7Q9UIA9 1087 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 TRIM49D1C9J1S8 452 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 AP1G1O43747 822 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 BASP1P80723 227 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 SNRNP35Q16560 246 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 ZCCHC23Q6ZST2 131 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 HPS6Q86YV9 775 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 RAB3IL1Q8TBN0 382 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 CPT1BQ92523 772 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 DCUN1D1Q96GG9 259 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 MXRA8Q9BRK3 442 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 RBM38Q9H0Z9 239 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 UBAP1Q9NZ09 502 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 CNTN3Q9P232 1028 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 THEGQ9P2T0 379 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 FAM32AQ9Y421 112 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 HBS1LQ9Y450 684 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 SH3PXD2BA1X283 911 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 TTLL13PA6NNM8 815 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 H3BSA7 217 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 MATN2O00339 956 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 FBP2O00757 339 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 KLF11O14901 512 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 FAM155BO75949 473 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 TNFAIP8O95379 198 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SLC5A2P31639 672 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 HSD17B4P51659 736 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 BACE1P56817 501 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 SP4Q02446 784 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 PADI6Q6TGC4 694 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 DAW1Q8N136 415 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 RSAD2Q8WXG1 361 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 LPAR1Q92633 364 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 LXNQ9BS40 222 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 TUT1Q9H6E5 874 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 GPRC5DQ9NZD1 345 aa18.78■□□□□ 0.6
PKP3-201ENST00000331563 DRG1Q9Y295 367 aaKnown RBP18.78■□□□□ 0.6
PKP3-201ENST00000331563 LOC100653049A0A140TA62 436 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.77■□□□□ 0.6
PKP3-201ENST00000331563 PLA2G6O60733 806 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 KRT34O76011 436 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 MAMLD1Q13495 774 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 DEFB107AQ8IZN7 70 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 PPM1NQ8N819 430 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 TTC13Q8NBP0 860 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 RIN3Q8TB24 985 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 CDH22Q9UJ99 828 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 AGTPBP1Q9UPW5 1226 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 POMPQ9Y244 141 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 IVNS1ABPQ9Y6Y0 642 aa18.77■□□□□ 0.6
PKP3-201ENST00000331563 KAT6AQ92794 2004 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 TCRBV7S3A2A0A539 114 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 TESPA1A2RU30 521 aaPredicted RBP18.77■□□□□ 0.59
PKP3-201ENST00000331563 VWA5AO00534 786 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 CCNT2O60583 730 aaKnown RBP18.77■□□□□ 0.59
PKP3-201ENST00000331563 PDGFRBP09619 1106 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 NAA20P61599 178 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 SLC18A2Q05940 514 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 BAATQ14032 418 aaPredicted RBP18.77■□□□□ 0.59
PKP3-201ENST00000331563 SPOCD1Q6ZMY3 1216 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 MARVELD2Q8N4S9 558 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 KCTD17Q8N5Z5 321 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 ZNF280CQ8ND82 737 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 FAM84AQ96KN4 292 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 RMDN3Q96TC7 470 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 WDR83Q9BRX9 315 aaKnown RBP18.77■□□□□ 0.59
PKP3-201ENST00000331563 SNCAIPQ9Y6H5 919 aa18.77■□□□□ 0.59
PKP3-201ENST00000331563 TCRBV9S1A1TA0A576 114 aa18.76■□□□□ 0.59
PKP3-201ENST00000331563 TOM1L1O75674 476 aa18.76■□□□□ 0.59
PKP3-201ENST00000331563 IL1BP01584 269 aa18.76■□□□□ 0.59
PKP3-201ENST00000331563 OASLQ15646 514 aaKnown RBP18.76■□□□□ 0.59
PKP3-201ENST00000331563 DRICH1Q6PGQ1 229 aaPredicted RBP18.76■□□□□ 0.59
PKP3-201ENST00000331563 POMGNT1Q8WZA1 660 aa18.76■□□□□ 0.59
PKP3-201ENST00000331563 TSC22D4Q9Y3Q8 395 aa18.76■□□□□ 0.59
PKP3-201ENST00000331563 MYPNQ86TC9 1320 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms