RNA–Protein interactions for RNA: ENST00000331450.9

LRRC28-202, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 752 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-202ENST00000331450 AKR1B10O60218 316 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 ECI2O75521 394 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 RRM1P23921 792 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 C10orf120Q5SQS8 335 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 PPP1R15BQ5SWA1 713 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 SYPL2Q5VXT5 272 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 TRNP1Q6NT89 227 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 TADA2BQ86TJ2 420 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 ADAMTS19Q8TE59 1207 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 ELSPBP1Q96BH3 223 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 PDLIM2Q96JY6 352 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 CCDC42Q96M95 316 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 SMOC2Q9H3U7 446 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 DEF6Q9H4E7 631 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 METTL5Q9NRN9 209 aaKnown RBP16.78■□□□□ 0.28
LRRC28-202ENST00000331450 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 DNMT3LQ9UJW3 386 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 NAALADL1Q9UQQ1 740 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 CPQQ9Y646 472 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 NUMBLQ9Y6R0 609 aa16.78■□□□□ 0.28
LRRC28-202ENST00000331450 GRAP2O75791 330 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 LCA5LO95447 670 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 IGLV3-25P01717 112 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 MBL2P11226 248 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-202ENST00000331450 NCAM1P13591 858 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 FLT3P36888 993 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 VIPR2P41587 438 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 EFEMP1Q12805 493 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 ZNF77Q15935 545 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 CCDC122Q5T0U0 273 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 TANGO2Q6ICL3 276 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 PLEKHA7Q6IQ23 1121 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 VITQ6UXI7 678 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 RSRC2Q7L4I2 434 aaKnown RBP16.77■□□□□ 0.28
LRRC28-202ENST00000331450 TMTC1Q8IUR5 882 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 CCDC170Q8IYT3 715 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 DEFB106AQ8N104 65 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 CELF5Q8N6W0 485 aaKnown RBP16.77■□□□□ 0.28
LRRC28-202ENST00000331450 DQX1Q8TE96 717 aaKnown RBP16.77■□□□□ 0.28
LRRC28-202ENST00000331450 RNF139Q8WU17 664 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 NXPE3Q969Y0 559 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 E2F7Q96AV8 911 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 TRIM11Q96F44 468 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 LRRC3BQ96PB8 259 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 KXD1Q9BQD3 176 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 KLF16Q9BXK1 252 aaPredicted RBP16.77■□□□□ 0.28
LRRC28-202ENST00000331450 ZFP14Q9HCL3 533 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 MARCH2Q9P0N8 246 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 IGSF9Q9P2J2 1179 aa16.77■□□□□ 0.28
LRRC28-202ENST00000331450 SOWAHDA6NJG2 315 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 ATMINO43313 823 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 GJB6O95452 261 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 MYBL1P10243 752 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 MATKP42679 507 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 PITX1P78337 314 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 EIF4EBP2Q13542 120 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 OTUD1Q5VV17 481 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 PHLDB2Q86SQ0 1253 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 JOSD2Q8TAC2 188 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 SH3RF2Q8TEC5 729 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 NT5C3BQ969T7 300 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 ZNF653Q96CK0 615 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 NPY6RQ99463 290 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 BAG1Q99933 345 aaPredicted RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 RPP25Q9BUL9 199 aaKnown RBP16.76■□□□□ 0.27
LRRC28-202ENST00000331450 PLA2G2FQ9BZM2 168 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 NACA2Q9H009 215 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 KCNK12Q9HB15 430 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 SMPD4Q9NXE4 827 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 LIMD1Q9UGP4 676 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 RASAL2Q9UJF2 1139 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 MYO10Q9HD67 2058 aa16.76■□□□□ 0.27
LRRC28-202ENST00000331450 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 SIGLEC16A6NMB1 481 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 HEPACAM2A8MVW5 462 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 LEFTY2O00292 366 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 CAPN9O14815 690 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 GREM1O60565 184 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 IGLV3-27P01718 113 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 NOS2P35228 1153 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 GALCP54803 685 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 FCHO2Q0JRZ9 810 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 NNTQ13423 1086 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 MTF1Q14872 753 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 DNAJC24Q6P3W2 148 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 RAD9BQ6WBX8 426 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 BNIPLQ7Z465 357 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 TAC4Q86UU9 113 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 DDX42Q86XP3 938 aaKnown RBP eCLIP16.75■□□□□ 0.27
LRRC28-202ENST00000331450 MIB1Q86YT6 1006 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 MFSD6LQ8IWD5 586 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 KIAA1958Q8N8K9 716 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 DEPDC1BQ8WUY9 529 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 WBP2Q969T9 261 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 DDX23Q9BUQ8 820 aaKnown RBP16.75■□□□□ 0.27
LRRC28-202ENST00000331450 SELENOOQ9BVL4 669 aa16.75■□□□□ 0.27
LRRC28-202ENST00000331450 PACSIN1Q9BY11 444 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms