RNA–Protein interactions for RNA: ENST00000331366.9

CPNE8-201, Transcript of copine 8, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPNE8, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-201ENST00000331366 CD58P19256 250 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 CA4P22748 312 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 EPHB2P29323 1055 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 RFC1P35251 1148 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ROR1Q01973 937 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GALNT1Q10472 559 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 BAATQ14032 418 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ZRSR2Q15696 482 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLC14A2Q15849 920 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF484Q5JVG2 852 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 HHATQ5VTY9 493 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KCTD11Q693B1 232 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 HACD2Q6Y1H2 254 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GPIHBP1Q8IV16 184 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 UNC45BQ8IWX7 931 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ADAMTS16Q8TE57 1224 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GTF3C2Q8WUA4 911 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLC35F5Q8WV83 523 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KCTD13Q8WZ19 329 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SPOCK2Q92563 424 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 PPP2R3CQ969Q6 453 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GPR20Q99678 358 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 PI4K2AQ9BTU6 479 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 RAVER2Q9HCJ3 691 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SEPT11Q9NVA2 429 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ETNK2Q9NVF9 386 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 PRMT7Q9NVM4 692 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 IRAK4Q9NWZ3 460 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 XPO7Q9UIA9 1087 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TRIM33Q9UPN9 1127 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLC45A1Q9Y2W3 748 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 RIPK3Q9Y572 518 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 EP400Q96L91 3159 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SMIM31A0A1B0GVY4 71 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 K7ERI5 159 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 IGHA2P01877 340 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KRT3P12035 628 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SKIP12755 728 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GPD1P21695 349 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 UBA1P22314 1058 aaKnown RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SNX16P57768 344 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 PTPN11Q06124 597 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SNX1Q13596 522 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TAF11Q15544 211 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 CCDC153Q494R4 210 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 FOXB2Q5VYV0 432 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 KBTBD6Q86V97 674 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ANKRD13AQ8IZ07 590 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 CRYBG2Q8N1P7 616 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TTLL6Q8N841 843 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TRPC4APQ8TEL6 797 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 TMEM176AQ96HP8 235 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF778Q96MU6 729 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SORT1Q99523 831 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 ZNF696Q9H7X3 374 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 GDAP2Q9NXN4 497 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 SLC17A7Q9P2U7 560 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 BARX2Q9UMQ3 279 aaPredicted RBP9.11□□□□□ -0.95
CPNE8-201ENST00000331366 USP18Q9UMW8 372 aa9.11□□□□□ -0.95
CPNE8-201ENST00000331366 NYNRINQ9P2P1 1898 aaKnown RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 TCRBV7S3A2A0A539 114 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 MCF2LO15068 1137 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 LPXNO60711 386 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 GLRA3O75311 464 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 KRT37O76014 449 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 WISP3O95389 354 aaPredicted RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 CYP2C9P11712 490 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 TARSP26639 723 aaKnown RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 MIPP30301 263 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 PTK7Q13308 1070 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 APOFQ13790 326 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 SWSAP1Q6NVH7 229 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 CCDC110Q8TBZ0 833 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 NTAN1Q96AB6 310 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 LRGUKQ96M69 825 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 PWWP2AQ96N64 755 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 SRPK1Q96SB4 655 aaKnown RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 IL22Q9GZX6 179 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 RBM38Q9H0Z9 239 aaKnown RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 FNIP2Q9P278 1114 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 DCDC2Q9UHG0 476 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 MATN2O00339 956 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 FCHO1O14526 889 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 TBX10O75333 385 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 PROCP04070 461 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 COL6A2P12110 1019 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 CYP3A5P20815 502 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 NAA25Q14CX7 972 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 ADRM1Q16186 407 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 ZBTB41Q5SVQ8 909 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 TEDDM1Q5T9Z0 273 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 MTDHQ86UE4 582 aaKnown RBP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 KIRREL3Q8IZU9 778 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.1□□□□□ -0.95
CPNE8-201ENST00000331366 JOSD2Q8TAC2 188 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 GDAP1Q8TB36 358 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 DEPTORQ8TB45 409 aa9.1□□□□□ -0.95
CPNE8-201ENST00000331366 SCG3Q8WXD2 468 aaKnown RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms