RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
DDX41-201ENST00000330503 PCDHB8Q9UN66 801 aa17.65■□□□□ 0.42
DDX41-201ENST00000330503 DCDC2CA8MYV0 355 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 DNM1LO00429 736 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 TGM2P21980 687 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 BCAR1P56945 870 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 ROR1Q01973 937 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 MORF4L2Q15014 288 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 TCTN1Q2MV58 587 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 KDM7AQ6ZMT4 941 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 ZC3H18Q86VM9 953 aaKnown RBP17.64■□□□□ 0.41
DDX41-201ENST00000330503 TMPRSS4Q9NRS4 437 aa17.64■□□□□ 0.41
DDX41-201ENST00000330503 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
DDX41-201ENST00000330503 NOVA2Q9UNW9 492 aaKnown RBP17.64■□□□□ 0.41
DDX41-201ENST00000330503 FARP1Q9Y4F1 1045 aaPredicted RBP17.64■□□□□ 0.41
DDX41-201ENST00000330503 M0QYT0 321 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 SHOX2O60902 331 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 ACSL3O95573 720 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 MYCP01106 439 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 NR1D1P20393 614 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 MTFR1Q15390 333 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 PLEKHG4Q58EX7 1191 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 ZNF771Q7L3S4 317 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 THEM5Q8N1Q8 247 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 DBF4BQ8NFT6 615 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 TLCD1Q96CP7 247 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.413e-7■□□□□ 10.7
DDX41-201ENST00000330503 SEZ6LQ9BYH1 1024 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 PAK6Q9NQU5 681 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 DNAJB4Q9UDY4 337 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 USP3Q9Y6I4 520 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 ZBED1O96006 694 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 STIP1P31948 543 aaKnown RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 CTCFP49711 727 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 ATP1A2P50993 1020 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 SLC10A2Q12908 348 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 FAM182AQ5T1J6 154 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 ANKRD22Q5VYY1 191 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 URGCPQ8TCY9 931 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 CPT1BQ92523 772 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 PRCCQ92733 491 aaPredicted RBP17.63■□□□□ 0.41
DDX41-201ENST00000330503 CSPG4P5Q96PW8 444 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 PIGVQ9NUD9 493 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 TMEM161AQ9NX61 479 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 HEY1Q9Y5J3 304 aa17.63■□□□□ 0.41
DDX41-201ENST00000330503 SYNJ2BP-COX16A0A087WUM0 186 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 H7C0C1 242 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 TMEM189-UBE2V1I3L0A0 370 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 COL6A1P12109 1028 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 CAPN2P17655 700 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 RDXP35241 583 aaKnown RBP17.62■□□□□ 0.41
DDX41-201ENST00000330503 MAGEA4P43358 317 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 ATP5OP48047 213 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 BFSP2Q13515 415 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 SKIDA1Q1XH10 827 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 PM20D1Q6GTS8 502 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 EPS8L3Q8TE67 593 aaKnown RBP17.62■□□□□ 0.41
DDX41-201ENST00000330503 ETNK2Q9NVF9 386 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 COX16Q9P0S2 106 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 KANSL3Q9P2N6 904 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 STAP1Q9ULZ2 295 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 TLDC2A0PJX2 215 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 AMPD1P23109 780 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 OR1G1P47890 313 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 GAD2Q05329 585 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 C6orf118Q5T5N4 469 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 HOOK3Q86VS8 718 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 PSTKQ8IV42 348 aaKnown RBP17.62■□□□□ 0.41
DDX41-201ENST00000330503 NAT8LQ8N9F0 302 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 PGM2Q96G03 612 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 C9orf72Q96LT7 481 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 DEFB118Q96PH6 123 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 SHOC2Q9UQ13 582 aa17.62■□□□□ 0.41
DDX41-201ENST00000330503 NLRC5Q86WI3 1866 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 TCRBV7S3A2A0A539 114 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 ARHGEF37A1IGU5 675 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 BCLAF3A2AJT9 711 aaKnown RBP17.61■□□□□ 0.41
DDX41-201ENST00000330503 MAP3K6O95382 1288 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 LTFP02788 710 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 GOT1P17174 413 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 GBE1Q04446 702 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 YWHAHQ04917 246 aaPredicted RBP17.61■□□□□ 0.41
DDX41-201ENST00000330503 DEUP1Q05D60 604 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 NME3Q13232 169 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 PCGF5Q86SE9 256 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 PPIL6Q8IXY8 311 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 TAB3Q8N5C8 712 aaPredicted RBP17.61■□□□□ 0.41
DDX41-201ENST00000330503 LRRN4Q8WUT4 740 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 CAPS2Q9BXY5 557 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 ELAC1Q9H777 363 aaKnown RBP17.61■□□□□ 0.41
DDX41-201ENST00000330503 WDR6Q9NNW5 1121 aaKnown RBP17.61■□□□□ 0.41
DDX41-201ENST00000330503 SAYSD1Q9NPB0 183 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 MFHAS1Q9Y4C4 1052 aa17.61■□□□□ 0.41
DDX41-201ENST00000330503 OAZ2O95190 189 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 RBL1P28749 1068 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 GATMP50440 423 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 IRAK1P51617 712 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 MAGOHP61326 146 aaKnown RBP17.6■□□□□ 0.41
DDX41-201ENST00000330503 TSPY1Q01534 308 aa17.6■□□□□ 0.41
DDX41-201ENST00000330503 RNASELQ05823 741 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms