RNA–Protein interactions for RNA: ENST00000323853.9

SNRNP200-201, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP200, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-201ENST00000323853 NFYCQ13952 458 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 TTMPQ5BVD1 217 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 MIIPQ5JXC2 388 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 CARNMT1Q8N4J0 409 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 CPNE1Q99829 537 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 BTBD10Q9BSF8 475 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 KIAA1683Q9H0B3 1180 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 DDX4Q9NQI0 724 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 NDST1P52848 882 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 ZCWPW2Q504Y3 356 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 N4BP2L1Q5TBK1 243 aaPredicted RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 MYO1HQ8N1T3 1032 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF606Q8WXB4 792 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 ANKRD63C9JTQ0 380 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 NKRFO15226 690 aaKnown RBP eCLIP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 FKBP6O75344 327 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 CRTAMO95727 393 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 MAP4K3Q8IVH8 894 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 CERKQ8TCT0 537 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 OXNAD1Q96HP4 312 aaPredicted RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 ABHD8Q96I13 439 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 SIKE1Q9BRV8 207 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 THUMPD3Q9BV44 507 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 M0R3G1 203 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 GLP2RO95838 553 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 TBL3Q12788 808 aaKnown RBP11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 RNF180Q86T96 592 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 BRD8Q9H0E9 1235 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 MYLK2Q9H1R3 596 aa11.23□□□□□ -0.61
SNRNP200-201ENST00000323853 NCANO14594 1321 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 BTNL10A8MVZ5 291 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 EML1O00423 815 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 RGL2O15211 777 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 LRG1P02750 347 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 YY1P25490 414 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 OAZ1P54368 228 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 MPP3Q13368 585 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CSHL1Q14406 222 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PPP4R4Q6NUP7 873 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 OTOAQ7RTW8 1153 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ZCCHC9Q8N567 271 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ACTL9Q8TC94 416 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC7A5P2Q9GIP4 190 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 H2AFY2Q9P0M6 372 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 SLC25A13Q9UJS0 675 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 SOX13Q9UN79 622 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PRG3Q9Y2Y8 225 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 SNX13Q9Y5W8 968 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PAEPP09466 180 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ALADP13716 330 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 TRIM60Q495X7 471 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 KCNK18Q7Z418 384 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 KIAA2013Q8IYS2 634 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 KATNAL2Q8IYT4 538 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 TERB1Q8NA31 727 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 TSEN2Q8NCE0 465 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PPP1R10Q96QC0 940 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 GIMAP4Q9NUV9 329 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 STK25O00506 426 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 THP07101 528 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 NR2C2P49116 596 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 IFI35P80217 286 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ITGA9Q13797 1035 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CRYMQ14894 314 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 IL17AQ16552 155 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PGS1Q32NB8 556 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 TCP10LQ8TDR4 215 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 LRRC4BQ9NT99 713 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ATP9AO75110 1047 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ASS1P00966 412 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CYP1A2P05177 515 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PECAM1P16284 738 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ALDH5A1P51649 535 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 NAB1Q13506 487 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 POLD3Q15054 466 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 GRIK4Q16099 956 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 FBXO47Q5MNV8 452 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 IZUMO2Q6UXV1 221 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ERO1BQ86YB8 467 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 APOL2Q9BQE5 337 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 GPAMQ9HCL2 828 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 INTS13Q9NVM9 706 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ACOT9Q9Y305 439 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 MEI4A8MW99 385 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 HACD1B0YJ81 288 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ZNF23P17027 643 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CCDC81Q6ZN84 652 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 FAM83AQ86UY5 434 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 PLEKHA8Q96JA3 519 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CATSPER2Q96P56 530 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 KCTD14Q9BQ13 255 aaPredicted RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 NT5MQ9NPB1 228 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 ADARB2Q9NS39 739 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 DDX43Q9NXZ2 648 aaKnown RBP11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 GPRC5DQ9NZD1 345 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 CNTNAP2Q9UHC6 1331 aa11.22□□□□□ -0.61
SNRNP200-201ENST00000323853 A0A0U1RQJ8 604 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms