RNA–Protein interactions for RNA: ENST00000321545.4

ZNF543-201, Transcript of zinc finger protein 543, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF543, Length 3,659 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF543-201ENST00000321545 RSPH1Q8WYR4 309 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 ATXN7L3BQ96GX2 97 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 VCPIP1Q96JH7 1222 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 CRTAC1Q9NQ79 661 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 SLC12A8A0AV02 714 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 RPL21P46778 160 aaKnown RBP11.78□□□□□ -0.52
ZNF543-201ENST00000321545 PCBP1Q15365 356 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF543-201ENST00000321545 VARS2Q5ST30 1063 aaKnown RBP11.78□□□□□ -0.52
ZNF543-201ENST00000321545 CPLX4Q7Z7G2 160 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 IFNLR1Q8IU57 520 aaPredicted RBP11.78□□□□□ -0.52
ZNF543-201ENST00000321545 HHIPL1Q96JK4 782 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 DUSP16Q9BY84 665 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 TKTL2Q9H0I9 626 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 TXNDC16Q9P2K2 825 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 KANSL3Q9P2N6 904 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 PSTPIP1O43586 416 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 CLDN10P78369 228 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 TMED2Q15363 201 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 TTC27Q6P3X3 843 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 DCLRE1AQ6PJP8 1040 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 TTC9BQ8N6N2 239 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 GPR62Q9BZJ7 368 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 FAM53CQ9NYF3 392 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 ADAM28Q9UKQ2 775 aa11.78□□□□□ -0.52
ZNF543-201ENST00000321545 E2F8A0AVK6 867 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PIRO00625 290 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 ENPP3O14638 875 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PMM2O15305 246 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 USP12O75317 370 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 NNTQ13423 1086 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 CLUL1Q15846 466 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 LHX8Q68G74 356 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 KLHDC9Q8NEP7 349 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 EXD1Q8NHP7 514 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 KBTBD7Q8WVZ9 684 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 FAM167BQ9BTA0 163 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 ENTPD7Q9NQZ7 604 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 OTOFQ9HC10 1997 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 ATP9BO43861 1147 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 TSPAN3O60637 253 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 NBNO60934 754 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 TRUB2O95900 331 aaKnown RBP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 URODP06132 367 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 SP100P23497 879 aaPredicted RBP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 KDELR1P24390 212 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 IRAK1P51617 712 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 IRX4P78413 519 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PLD1Q13393 1074 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 SEPT6Q14141 434 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PCSK7Q16549 785 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 LONRF1Q17RB8 773 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 BOLA3Q53S33 107 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 FUT10Q6P4F1 479 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 EMBQ6PCB8 327 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 CLEC20AQ6ZU45 233 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 CHSY1Q86X52 802 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 RYBPQ8N488 228 aaPredicted RBP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 CCDC185Q8N715 623 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 PYROXD1Q8WU10 500 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 RSRC1Q96IZ7 334 aaKnown RBP11.77□□□□□ -0.53
ZNF543-201ENST00000321545 SLITRK1Q96PX8 696 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 VANGL2Q9ULK5 521 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 CHMP2BQ9UQN3 213 aa11.77□□□□□ -0.53
ZNF543-201ENST00000321545 C9IYK1 514 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 PSEN1P49768 467 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 ZNF143P52747 638 aaPredicted RBP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 PMS2P54278 862 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 SATB1Q01826 763 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 MBTPS1Q14703 1052 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 GLE1Q53GS7 698 aaKnown RBP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 GPRIN1Q7Z2K8 1008 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 TOP6BLQ8N6T0 577 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 SPDL1Q96EA4 605 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 RPRD1AQ96P16 312 aaPredicted RBP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 ZIM3Q96PE6 472 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 RBM15Q96T37 977 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 FTHL17Q9BXU8 183 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 SEMA4AQ9H3S1 761 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 NRDE2Q9H7Z3 1164 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 CDH9Q9ULB4 789 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 STK38LQ9Y2H1 464 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 CCDC85CA6NKD9 419 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 GOLGA8RI6L899 631 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 DNM1LO00429 736 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 KCNE1P15382 129 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 RPL9P32969 192 aaKnown RBP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 ALDH1A3P47895 512 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 SLC11A1P49279 550 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 CUL1Q13616 776 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 SLC29A2Q14542 456 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 CLLU1OSQ5K130 101 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 OR10T2Q8NGX3 314 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 KLF6Q99612 283 aaPredicted RBP11.76□□□□□ -0.53
ZNF543-201ENST00000321545 HERPUD2Q9BSE4 406 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 DCLK3Q9C098 648 aa11.76□□□□□ -0.53
ZNF543-201ENST00000321545 ATXN3LQ9H3M9 355 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms