RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 HGSO14964 777 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 NCAM1P13591 858 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 NUMBP49757 651 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 YWHAZP63104 245 aaKnown RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 TFDP2Q14188 446 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 DRICH1Q6PGQ1 229 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 CENPUQ71F23 418 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SLC26A9Q7LBE3 791 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 CPLX4Q7Z7G2 160 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 ZNF317Q96PQ6 595 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 KCTD15Q96SI1 283 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SLC38A7Q9NVC3 462 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SNX10Q9Y5X0 201 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 TMEM120BA0PK00 339 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 KPNA6O60684 536 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SETSIPP0DME0 302 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 KRT15P19012 456 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SNX16P57768 344 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SLC10A2Q12908 348 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 ACAP1Q15027 740 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SPRED3Q2MJR0 410 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 VSTM1Q6UX27 236 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 C4orf33Q8N1A6 199 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 TOP6BLQ8N6T0 577 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 FBXO36Q8NEA4 188 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SEC16BQ96JE7 1060 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 LGMNQ99538 433 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 TRPM7Q96QT4 1865 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 VIMP08670 466 aaKnown RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 L1CAMP32004 1257 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 PTPN7P35236 360 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 GTF2A1P52655 376 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 MORF4L2Q15014 288 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 NOMO1Q15155 1222 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 RNF187Q5TA31 235 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 CCHCR1Q8TD31 782 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 CHMP6Q96FZ7 201 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SERPINB12Q96P63 405 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 KLF6Q99612 283 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 SMOQ99835 787 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 RASSF4Q9H2L5 321 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 NRDE2Q9H7Z3 1164 aa16.56■□□□□ 0.24
SHISA2-201ENST00000319420 MAGED2Q9UNF1 606 aaPredicted RBP16.56■□□□□ 0.24
SHISA2-201ENST00000319420 RASA4BC9J798 803 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 GOLGA8RI6L899 631 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 XPO1O14980 1071 aaKnown RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 RASA4O43374 803 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 BRAFP15056 766 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 LRPAP1P30533 357 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 ACLYP53396 1101 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 ZKSCAN8Q15776 578 aaPredicted RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 C6orf89Q6UWU4 347 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 C3orf62Q6ZUJ4 267 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 FAM35AQ86V20 835 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 PPIL6Q8IXY8 311 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 LRRC34Q8IZ02 419 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 CCNYQ8ND76 341 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 HNRNPABQ99729 332 aaKnown RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 SRRM3A6NNA2 597 aaPredicted RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 AMHP03971 560 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 WARSP23381 471 aaKnown RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 MAGEA9P43362 315 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 MRPS5P82675 430 aaKnown RBP16.55■□□□□ 0.24
SHISA2-201ENST00000319420 IGDCC3Q8IVU1 814 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 PALM2Q8IXS6 379 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 CENPTQ96BT3 561 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 GLT1D1Q96MS3 346 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 CCDC77Q9BR77 488 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 PIGVQ9NUD9 493 aa16.55■□□□□ 0.24
SHISA2-201ENST00000319420 TTC3P53804 2025 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 MATKP42679 507 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 NOGQ13253 232 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 IRF5Q13568 498 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 UPP1Q16831 310 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 DEFB115Q30KQ5 88 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 SDHAF4Q5VUM1 108 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 KCNT2Q6UVM3 1135 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 RNF180Q86T96 592 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 ZNF280BQ86YH2 543 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 CFAP36Q96G28 342 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 TMLHEQ9NVH6 421 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 B4GALT3O60512 393 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 YWHAGP61981 247 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHISA2-201ENST00000319420 DEUP1Q05D60 604 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 MGAT3Q09327 533 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 TAZQ16635 292 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 MICALL1Q8N3F8 863 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 SMC1BQ8NDV3 1235 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 ZMIZ2Q8NF64 920 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 SCAMP5Q8TAC9 235 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 MYLPFQ96A32 169 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 B3GALT6Q96L58 329 aa16.54■□□□□ 0.24
SHISA2-201ENST00000319420 SCN10AQ9Y5Y9 1956 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 KIF3CO14782 793 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 GCAP28676 217 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 ACADSBP45954 432 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 ARL4CP56559 192 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 PDK2Q15119 407 aa16.53■□□□□ 0.24
SHISA2-201ENST00000319420 EFHC1Q5JVL4 640 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms