RNA–Protein interactions for RNA: ENST00000317868.8

ATG4C-201, Transcript of autophagy related 4C cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4C, Length 2,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-201ENST00000317868 QKIQ96PU8 341 aaKnown RBP eCLIP14.31□□□□□ -0.124e-18■■■■■ 60.8
ATG4C-201ENST00000317868 KLC2Q9H0B6 622 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 CDHR5Q9HBB8 845 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 MCM8Q9UJA3 840 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SLC15A5A6NIM6 579 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 BTBD19C9JJ37 291 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 TGDSO95455 350 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 ZBED1O96006 694 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 GCLCP48506 637 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 NOTUMQ6P988 496 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 GPR142Q7Z601 462 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 CDKL3Q8IVW4 592 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 CLEC4CQ8WTT0 213 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 APBB2Q92870 758 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 TSPAN18Q96SJ8 248 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 ETNK1Q9HBU6 452 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SMYD2Q9NRG4 433 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SMIM35A0A1B0GVV1 85 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 F2P00734 622 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 GBP2P32456 591 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 NR2C2P49116 596 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 BCAT1P54687 386 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SETDB1Q15047 1291 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 PNMA8AQ86V59 439 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 AGAP11Q8TF27 550 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SIGLEC10Q96LC7 697 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 LPIN3Q9BQK8 851 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 GCOM2Q9BZD3 368 aaPredicted RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 C12orf65Q9H3J6 166 aaKnown RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 ABHD16BQ9H3Z7 469 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 TLE6Q9H808 572 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 MANSC1Q9H8J5 431 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 SLC5A4Q9NY91 659 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 LNPEPQ9UIQ6 1025 aa14.31□□□□□ -0.12
ATG4C-201ENST00000317868 MYO18AQ92614 2054 aaKnown RBP14.31□□□□□ -0.12
ATG4C-201ENST00000317868 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 HCRTO43612 131 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 LPXNO60711 386 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 MT-ND3P03897 115 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 DARSP14868 501 aaKnown RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 IRF5Q13568 498 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 TTC39BQ5VTQ0 682 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 C9orf131Q5VYM1 1079 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 NCBP2-AS2Q69YL0 99 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 IQSEC1Q6DN90 963 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 ANKRD23Q86SG2 305 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 OR6J1Q8NGC5 347 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 KCTD15Q96SI1 283 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 NXF3Q9H4D5 531 aaKnown RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 KCNK13Q9HB14 408 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 SETD4Q9NVD3 440 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 BAIAP2L1Q9UHR4 511 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 UBQLN1Q9UMX0 589 aaKnown RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 A6NJR5 290 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 A8MUI8 341 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 CXorf49A8MYA2 514 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 GOLGA8RI6L899 631 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 DGKIO75912 1065 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 RECQL4O94761 1208 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 METTL18O95568 372 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 KCNE1P15382 129 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 ZFXP17010 805 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 AXLP30530 894 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 SEMA5AQ13591 1074 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 SCYL2Q6P3W7 929 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 CYS1Q717R9 158 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 STRADAQ7RTN6 431 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 NLRP9Q7RTR0 991 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 KLF6Q99612 283 aaPredicted RBP14.3□□□□□ -0.12
ATG4C-201ENST00000317868 TINF2Q9BSI4 451 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 YY1AP1Q9H869 796 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 HEY1Q9Y5J3 304 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 PTPRDP23468 1912 aa14.3□□□□□ -0.12
ATG4C-201ENST00000317868 NRCAMQ92823 1304 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 FAM159BA6NKW6 160 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 SPTLC1O15269 473 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 APOEP02649 317 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 INHBAP08476 426 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 ALDH3A1P30838 453 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 ATXN1P54253 815 aaKnown RBP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 YWHAGP61981 247 aaKnown RBP eCLIP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 GBE1Q04446 702 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 HIC1Q14526 733 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 TLDC1Q6P9B6 456 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 RPAINQ86UA6 219 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 CCDC110Q8TBZ0 833 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 HSFY1Q96LI6 401 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 CSPG4P5Q96PW8 444 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 SAR1AQ9NR31 198 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 RCOR3Q9P2K3 495 aaPredicted RBP14.29□□□□□ -0.12
ATG4C-201ENST00000317868 HES2Q9Y543 173 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 DNAJC6O75061 913 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 RFPL1O75677 317 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 CCDC130P13994 396 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 YBX3P16989 372 aaKnown RBP eCLIP14.29□□□□□ -0.122e-7■■■■□ 24.3
ATG4C-201ENST00000317868 FBXO47Q5MNV8 452 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 UBXN11Q5T124 520 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 FAM182AQ5T1J6 154 aa14.29□□□□□ -0.12
ATG4C-201ENST00000317868 UNC5AQ6ZN44 842 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms