RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 HPS6Q86YV9 775 aa16.9■□□□□ 0.3
CACFD1-202ENST00000316948 GPRASP2Q96D09 838 aa16.9■□□□□ 0.3
CACFD1-202ENST00000316948 RHBDL2Q9NX52 303 aa16.9■□□□□ 0.3
CACFD1-202ENST00000316948 CHCHD3Q9NX63 227 aaKnown RBP16.9■□□□□ 0.3
CACFD1-202ENST00000316948 TMCO1Q9UM00 188 aa16.9■□□□□ 0.3
CACFD1-202ENST00000316948 CNTN6Q9UQ52 1028 aa16.9■□□□□ 0.3
CACFD1-202ENST00000316948 CAPN8A6NHC0 703 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 FAM200BP0CF97 657 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 CSH1P0DML2 217 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 CSH2P0DML3 217 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 AOC1P19801 751 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 C1orf228Q6PIY5 440 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 RBM44Q6ZP01 1051 aaKnown RBP16.89■□□□□ 0.3
CACFD1-202ENST00000316948 PDGFDQ9GZP0 370 aaPredicted RBP16.89■□□□□ 0.3
CACFD1-202ENST00000316948 DDX18Q9NVP1 670 aaKnown RBP16.89■□□□□ 0.3
CACFD1-202ENST00000316948 PACSIN3Q9UKS6 424 aa16.89■□□□□ 0.3
CACFD1-202ENST00000316948 C15orf38-AP3S2A0A0A6YYH1 394 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 APOC4-APOC2K7ER74 178 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 PDLIM1O00151 329 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 VWA5AO00534 786 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ITGBL1O95965 494 aaPredicted RBP16.89■□□□□ 0.29
CACFD1-202ENST00000316948 APOC2P02655 101 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ENPEPQ07075 957 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 KCNJ11Q14654 390 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 FKBP1CQ5VVH2 108 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ARPINQ7Z6K5 226 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 WDR75Q8IWA0 830 aaKnown RBP16.89■□□□□ 0.29
CACFD1-202ENST00000316948 THNSL1Q8IYQ7 743 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 DEFB107AQ8IZN7 70 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ICA1LQ8NDH6 482 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 APOBEC2Q9Y235 224 aaKnown RBP16.89■□□□□ 0.29
CACFD1-202ENST00000316948 MAD1L1Q9Y6D9 718 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 COL4A5P29400 1685 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 PFDN1O60925 122 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ITGA2BP08514 1039 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ZNF132P52740 706 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 RPL10AP62906 217 aaKnown RBP16.89■□□□□ 0.29
CACFD1-202ENST00000316948 TAP1Q03518 808 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 WASHC5Q12768 1159 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 GRM2Q14416 872 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 ANKRD20A4Q4UJ75 823 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 DENND1BQ6P3S1 775 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 NIPA2Q8N8Q9 360 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 FLAD1Q8NFF5 587 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 DEPTORQ8TB45 409 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 CGRRF1Q99675 332 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 CISHQ9NSE2 258 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 THAP1Q9NVV9 213 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 CDH22Q9UJ99 828 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 STYXL1Q9Y6J8 313 aa16.89■□□□□ 0.29
CACFD1-202ENST00000316948 CNTNAP2Q9UHC6 1331 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 SMIM31A0A1B0GVY4 71 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 TTLL13PA6NNM8 815 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 SPAG6O75602 509 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 PENKP01210 267 aaPredicted RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 C1QAP02745 245 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 APRTP07741 180 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 ATP6V1B1P15313 513 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 CD19P15391 556 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 PSMC1P62191 440 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 PTPN20Q4JDL3 420 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 FASTKD1Q53R41 847 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 TRMT10BQ6PF06 316 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 UGT2A3Q6UWM9 527 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 ABHD15Q6UXT9 468 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 TRIM74Q86UV6 250 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 TRIM73Q86UV7 250 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 LENG1Q96BZ8 264 aaPredicted RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 ZNF778Q96MU6 729 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 DNAAF2Q9NVR5 837 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 POMPQ9Y244 141 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 EFR3BQ9Y2G0 817 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 INPP5FQ9Y2H2 1132 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 SIN3BO75182 1162 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 KRT38O76015 456 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 LSM8O95777 96 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 NCF2P19878 526 aaPredicted RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 KCNA4P22459 653 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 TNFSF9P41273 254 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 MYL6P60660 151 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 SMAD1Q15797 465 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 VWA5B1Q5TIE3 1220 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 SNRNP48Q6IEG0 339 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 DGCR14Q96DF8 476 aaKnown RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 FRMD8P1Q9BZ68 369 aaPredicted RBP16.88■□□□□ 0.29
CACFD1-202ENST00000316948 CENPFP49454 3210 aa16.88■□□□□ 0.29
CACFD1-202ENST00000316948 KCNN4O15554 427 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 CCNT2O60583 730 aaKnown RBP16.87■□□□□ 0.29
CACFD1-202ENST00000316948 DKC1O60832 514 aaKnown RBP eCLIP16.87■□□□□ 0.295e-18■■■■■ 42.9
CACFD1-202ENST00000316948 MIPP30301 263 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 MAP3K21Q5TCX8 1036 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 POPDC2Q9HBU9 364 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 HSFX1Q9UBD0 423 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 PCDHGB4Q9UN71 923 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 PCDHGB5Q9Y5G0 923 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 H0YCG3 227 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 OSBPP22059 807 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 SP2Q02086 613 aa16.87■□□□□ 0.29
CACFD1-202ENST00000316948 ORC1Q13415 861 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms