RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 NCAPHQ15003 741 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 ZSCAN23Q3MJ62 389 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 MON1AQ86VX9 555 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 PDZD8Q8NEN9 1154 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 RPLP0P6Q8NHW5 317 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 SCAMP5Q8TAC9 235 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 FUCA2Q9BTY2 467 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 LSM14BQ9BX40 385 aaKnown RBP12.76□□□□□ -0.37
ABCD3-201ENST00000315713 FBXO44Q9H4M3 255 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 KIF9Q9HAQ2 790 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 FBRSL1Q9HCM7 1045 aaKnown RBP12.76□□□□□ -0.37
ABCD3-201ENST00000315713 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 COMMD8Q9NX08 183 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 DNAJC12Q9UKB3 198 aa12.76□□□□□ -0.37
ABCD3-201ENST00000315713 RALYQ9UKM9 306 aaKnown RBP12.76□□□□□ -0.37
ABCD3-201ENST00000315713 CCDC163A0A0D9SF12 145 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 SOBPA7XYQ1 873 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 RNF225M0QZC1 329 aaPredicted RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 TNFRSF10BO14763 440 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 ATG13O75143 517 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 CKMP06732 381 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 BRD2P25440 801 aaKnown RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 PDE6CP51160 858 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 BCAT1P54687 386 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 SHC2P98077 582 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 KCNMA1Q12791 1236 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 NFKBIBQ15653 356 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 PLK5Q496M5 336 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 CC2D1AQ6P1N0 951 aaPredicted RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 DHX40Q8IX18 779 aaKnown RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 ANKRD52Q8NB46 1076 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 OVCA2Q8WZ82 227 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 EZH1Q92800 747 aaPredicted RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 EDEM2Q9BV94 578 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 SIX2Q9NPC8 291 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 TDP1Q9NUW8 608 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 LIMA1Q9UHB6 759 aaKnown RBP12.75□□□□□ -0.37
ABCD3-201ENST00000315713 PCDHGA5Q9Y5G8 931 aa12.75□□□□□ -0.37
ABCD3-201ENST00000315713 C2orf78A6NCI8 922 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ZNF840PA6NDX5 716 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 M0QYV0 167 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 O00370 1275 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 DCLK1O15075 740 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 USP17L7P0C7H9 530 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ZNF18P17022 549 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 HDCP19113 662 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ZNF132P52740 706 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 TPM4P67936 248 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 BST2Q10589 180 aaKnown RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 USP4Q13107 963 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 RAPGEF1Q13905 1077 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 MTF1Q14872 753 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 STILQ15468 1287 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ZNF77Q15935 545 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 RNF43Q68DV7 783 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 PSAPL1Q6NUJ1 521 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 GPRIN1Q7Z2K8 1008 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 PIGZQ86VD9 579 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 TTC30AQ86WT1 665 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 CPA6Q8N4T0 437 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ARL14EPQ8N8R7 260 aaPredicted RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 UBA3Q8TBC4 463 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 TFAP2BQ92481 460 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ZC3H10Q96K80 434 aaKnown RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 SLC22A12Q96S37 553 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 DUSP15Q9H1R2 295 aaPredicted RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 HSD3B7Q9H2F3 369 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 VPS45Q9NRW7 570 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 GMIPQ9P107 970 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 CHORDC1Q9UHD1 332 aaPredicted RBP12.74□□□□□ -0.37
ABCD3-201ENST00000315713 WNT6Q9Y6F9 365 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 ATRXP46100 2492 aa12.74□□□□□ -0.37
ABCD3-201ENST00000315713 PKD1L2Q7Z442 2459 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 HHLA1C9JL84 531 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
ABCD3-201ENST00000315713 THAP12O43422 761 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 MED7O43513 233 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 KCNK5O95279 499 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 APBB3O95704 486 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 CALCAP01258 141 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 ATP1A3P13637 1013 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 PFKLP17858 780 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 DRD1P21728 446 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 GNA15P30679 374 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 GJA4P35212 333 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 GALK1P51570 392 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 CREB5Q02930 508 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 UBXN1Q04323 297 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 PDE4CQ08493 712 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 DMC1Q14565 340 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 ZNF268Q14587 947 aaPredicted RBP12.73□□□□□ -0.37
ABCD3-201ENST00000315713 PDGFRLQ15198 375 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 CNGA2Q16280 664 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 LCLAT1Q6UWP7 414 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 SHC3Q92529 594 aa12.73□□□□□ -0.37
ABCD3-201ENST00000315713 CYP2S1Q96SQ9 504 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms