RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 MAGEB18Q96M61 343 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 IGF2BP3O00425 579 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 B3GNT9Q6UX72 402 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ANKRD23Q86SG2 305 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 EFHBQ8N7U6 833 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 DPEP3Q9H4B8 488 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ARHGEF38Q9NXL2 777 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PARP4Q9UKK3 1724 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ENDOD1O94919 500 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 BDNFP23560 247 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ANO4Q32M45 955 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TAS2R42Q7RTR8 314 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PPTC7Q8NI37 304 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TTC8Q8TAM2 541 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PCYT2Q99447 389 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 COLEC11Q9BWP8 271 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ATXN3LQ9H3M9 355 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 IPPQ9Y573 584 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 KDM3BQ7LBC6 1761 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 MTSS1O43312 755 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ARHGAP1Q07960 439 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SNX17Q15036 470 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 DBN1Q16643 649 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 FSCBQ5H9T9 825 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TFAP2DQ7Z6R9 452 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LRRC52Q8N7C0 313 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LGMNQ99538 433 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LTFP02788 710 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 NOS2P35228 1153 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 AVPR1AP37288 418 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 GLRBP48167 497 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SLC10A6Q3KNW5 377 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ANKRD20A8PQ5CZ79 823 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HABP4Q5JVS0 413 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HEY2Q9UBP5 337 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 BAZ2BQ9UIF8 2168 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 YBX3P16989 372 aaKnown RBP eCLIP6.39□□□□□ -1.392e-8■■□□□ 13.4
PRKDC-201ENST00000314191 EFEMP1Q12805 493 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TCP10LQ8TDR4 215 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LHX5Q9H2C1 402 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HMGXB4Q9UGU5 601 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SLC12A8A0AV02 714 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ALOX15BO15296 676 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 AVILO75366 819 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 AQP5P55064 265 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HADHBP55084 474 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ZCCHC23Q6ZST2 131 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 POLNQ7Z5Q5 900 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 BHMTQ93088 406 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PPWD1Q96BP3 646 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HSFY1Q96LI6 401 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 FAM8A1Q9UBU6 413 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PTGIRP43119 386 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 FAM110CQ1W6H9 321 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 KIF19Q2TAC6 998 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 NBPF20Q3BBV1 942 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SPDYCQ5MJ68 293 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LCLAT1Q6UWP7 414 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ZCCHC9Q8N567 271 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 NDRG1Q92597 394 aaKnown RBP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 USP6NLQ92738 828 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TWNKQ96RR1 684 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 CATSPERBQ9H7T0 1116 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 LRRC40Q9H9A6 602 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 PRKAG2Q9UGJ0 569 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 CLGNO14967 610 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SCTRP47872 440 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SH2D4BQ5SQS7 431 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 C1orf220Q5T0J3 134 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRKDC-201ENST00000314191 SERPINI1Q99574 410 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 FICDQ9BVA6 458 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 TKTL2Q9H0I9 626 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 ALDH2P05091 517 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 HOXC6P09630 235 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 CCL14Q16627 93 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 KLC3Q6P597 504 aa6.39□□□□□ -1.39
PRKDC-201ENST00000314191 WDR27A2RRH5 827 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 OPHN1O60890 802 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ATG7O95352 703 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 USP17L7P0C7H9 530 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 TARSP26639 723 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 HNRNPH1P31943 449 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 DCAF12L1Q5VU92 463 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ACAD11Q709F0 780 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CCNJLQ8IV13 435 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SH3GL2Q99962 352 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 RNF39Q9H2S5 420 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 PHRF1Q9P1Y6 1649 aaKnown RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 UNGP13051 313 aaPredicted RBP6.38□□□□□ -1.39
PRKDC-201ENST00000314191 GOT1P17174 413 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 CUL3Q13618 768 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 SDHAF4Q5VUM1 108 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ICE2Q659A1 982 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 C16orf46Q6P387 395 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 B3GALNT2Q8NCR0 500 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 WNT8BQ93098 351 aa6.38□□□□□ -1.39
PRKDC-201ENST00000314191 ZC3H4Q9UPT8 1303 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms