RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 TMEM120BA0PK00 339 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 ADCY6O43306 1168 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 AMPD2Q01433 879 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 ENPEPQ07075 957 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 CPXM1Q96SM3 734 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 RBM22Q9NW64 420 aaKnown RBP eCLIP14.14□□□□□ -0.153e-7■■■■■ 28.8
DDX54-202ENST00000314045 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.14□□□□□ -0.15
DDX54-202ENST00000314045 C4AP0C0L4 1744 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TMEM191CA6NGB0 347 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 SDR42E2A6NKP2 422 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 LCA5LO95447 670 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 EDNRBP24530 442 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 ACLYP53396 1101 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TIGD7Q6NT04 549 aaPredicted RBP14.14□□□□□ -0.15
DDX54-202ENST00000314045 FRA10AC1Q70Z53 315 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 UNC45BQ8IWX7 931 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 TMEM192Q8IY95 271 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 COLGALT1Q8NBJ5 622 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 JOSD2Q8TAC2 188 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 SERPINB12Q96P63 405 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 PCYT2Q99447 389 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 NAT9Q9BTE0 207 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 CINPQ9BW66 212 aaPredicted RBP14.14□□□□□ -0.15
DDX54-202ENST00000314045 TRMT13Q9NUP7 481 aaKnown RBP14.14□□□□□ -0.15
DDX54-202ENST00000314045 ARHGEF38Q9NXL2 777 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 SHOC2Q9UQ13 582 aa14.14□□□□□ -0.15
DDX54-202ENST00000314045 RRP15Q9Y3B9 282 aaKnown RBP14.14□□□□□ -0.15
DDX54-202ENST00000314045 TCP11X1B4DZS4 312 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 IGF2BP3O00425 579 aaKnown RBP eCLIP14.13□□□□□ -0.15
DDX54-202ENST00000314045 SNX2O60749 519 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 CHEK2O96017 543 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 KITP10721 976 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ESRRAP11474 423 aaPredicted RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 MYL4P12829 197 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 PLA2G4AP47712 749 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 TAS2R40P59535 323 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 LAMB3Q13751 1172 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 DDX53Q86TM3 631 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 SAPCD2Q86UD0 394 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 RIBC1Q8N443 379 aaPredicted RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 PRELID2Q8N945 189 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ZNF516Q92618 1163 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ARL8AQ96BM9 186 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 SGSM3Q96HU1 749 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 SNRNP25Q9BV90 132 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 DYRK4Q9NR20 520 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ABCC13Q9NSE7 274 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 OLA1Q9NTK5 396 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 NDFIP2Q9NV92 336 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 AAR2Q9Y312 384 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 KLRC2P26717 231 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 AVPR1AP37288 418 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 RAD23BP54727 409 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 GEMIN4P57678 1058 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 SLC12A1Q13621 1099 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 MROH9Q5TGP6 573 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ITIH5Q86UX2 942 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 FAM35AQ86V20 835 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 DDI1Q8WTU0 396 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 CAVIN3Q969G5 261 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 DUSP16Q9BY84 665 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 PCMTD2Q9NV79 361 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 GTSE1Q9NYZ3 720 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 MARCH2Q9P0N8 246 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 MOSPD1Q9UJG1 213 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 SALL4Q9UJQ4 1053 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 Q9Y3F1 56 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 MYH6P13533 1939 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 MOXD2PA6NHM9 499 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 TRIM49D1C9J1S8 452 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ANKRD65E5RJM6 399 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 TTC4O95801 387 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ATP4AP20648 1035 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 PRMT2P55345 433 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 SLC39A4Q6P5W5 647 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 ILDR2Q71H61 639 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 EPS8L3Q8TE67 593 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 B3GNT5Q9BYG0 378 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 UBP1Q9NZI7 540 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 DNALI1O14645 258 aaPredicted RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 NDUFS3O75489 264 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 DCTN3O75935 186 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 FAM153BP0C7A2 387 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 NR2C2P49116 596 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 LILRA4P59901 499 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 FAM153CQ494X1 144 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 LRRC8DQ7L1W4 858 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 GBP7Q8N8V2 638 aaPredicted RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 HTR3CQ8WXA8 447 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 SNX27Q96L92 541 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 PRMT1Q99873 361 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 C10orf88Q9H8K7 445 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 TXLNGQ9NUQ3 528 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 FAM153AQ9UHL3 310 aa14.13□□□□□ -0.15
DDX54-202ENST00000314045 APOBEC2Q9Y235 224 aaKnown RBP14.13□□□□□ -0.15
DDX54-202ENST00000314045 TRIM66O15016 1216 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 PMM2O15305 246 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 F2P00734 622 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 PLEKHA7Q6IQ23 1121 aa14.12□□□□□ -0.15
DDX54-202ENST00000314045 CNPY4Q8N129 248 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms