RNA–Protein interactions for RNA: ENST00000313663.11

C2CD3-201, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C2CD3, Length 6,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-201ENST00000313663 TMEM39AQ9NV64 488 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 DRG1Q9Y295 367 aaKnown RBP9.19□□□□□ -0.94
C2CD3-201ENST00000313663 CAB39Q9Y376 341 aaPredicted RBP9.19□□□□□ -0.94
C2CD3-201ENST00000313663 MYO1CO00159 1063 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 AKR1A1P14550 325 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 MTF1Q14872 753 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 NPY5RQ15761 445 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 MTSS1LQ765P7 747 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 OSMRQ99650 979 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 PDCD2LQ9BRP1 358 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 MFSD1Q9H3U5 465 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 FBXO44Q9H4M3 255 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 NPHS2Q9NP85 383 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 TRIM17Q9Y577 477 aa9.19□□□□□ -0.94
C2CD3-201ENST00000313663 LAMB1P07942 1786 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 FAM237AA0A1B0GTK4 181 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 IGFBP4P22692 258 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 KLRC2P26717 231 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MTA1Q13330 715 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SLFN11Q7Z7L1 901 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ARID3BQ8IVW6 561 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 AGGF1Q8N302 714 aaeCLIP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MS4A14Q96JA4 679 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 IDI2Q9BXS1 227 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 OSBPL1AQ9BXW6 950 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 NFKBIZQ9BYH8 718 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SPATC1LQ9H0A9 340 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ELOVL6Q9H5J4 265 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 AHSPQ9NZD4 102 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 FBXL21Q9UKT6 434 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MTO1Q9Y2Z2 717 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 USP15Q9Y4E8 981 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 PCDHB5Q9Y5E4 795 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RGPD3A6NKT7 1758 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RGPD4Q7Z3J3 1758 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 PLIN4Q96Q06 1357 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 COL11A2P13942 1736 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 GNG14A0A1W2PPG7 69 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 B2RBV5 119 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CYTH3O43739 400 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SERPINI2O75830 405 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 HOXC6P09630 235 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SOX11P35716 441 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 WLSQ5T9L3 541 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 BTNL9Q6UXG8 535 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ADCK1Q86TW2 530 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ZNF557Q8N988 423 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 XPO6Q96QU8 1125 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 IFNA14P01570 189 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 PPP2R1BP30154 601 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 FXR1P51114 621 aaKnown RBP eCLIP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 DEFA1P59665 94 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 DEFA3P59666 94 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 HERVK_113P62684 666 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 VSNL1P62760 191 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MRPL28Q13084 256 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 LONRF1Q17RB8 773 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CCDC142Q17RM4 750 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 HLA-DQA1Q5Y7H0 255 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CBWD2Q8IUF1 395 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 HERC6Q8IVU3 1022 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SUGP1Q8IWZ8 645 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MTG1Q9BT17 334 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 THTPAQ9BU02 230 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MTMR12Q9C0I1 747 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TMX2Q9Y320 296 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 USP27XA6NNY8 438 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 H3BMM5 538 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 GTF2E2P29084 291 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TUFMP49411 452 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SCNN1BP51168 640 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 PRKAA1Q13131 559 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MDH1BQ5I0G3 518 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 EARS2Q5JPH6 523 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CES5AQ6NT32 575 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ATP8B4Q8TF62 1192 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 VPS33AQ96AX1 596 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TMEM159Q96B96 161 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 PRRG3Q9BZD7 231 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RRN3Q9NYV6 651 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 DBR1Q9UK59 544 aaKnown RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ZNF711Q9Y462 761 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SDR42E2A6NKP2 422 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ALBP02768 609 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TNNI3P19429 210 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SHMT1P34896 483 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 MARC1Q5VT66 337 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CAMKK1Q8N5S9 505 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 TNFRSF25Q93038 417 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ERP27Q96DN0 273 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 CNDP1Q96KN2 507 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 SYT15Q9BQS2 421 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 FRMD8P1Q9BZ68 369 aaPredicted RBP9.18□□□□□ -0.94
C2CD3-201ENST00000313663 OSBPL6Q9BZF3 934 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 ZCWPW1Q9H0M4 648 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RGS18Q9NS28 235 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RNF112Q9ULX5 631 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
C2CD3-201ENST00000313663 A0A087WZ62 844 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms