RNA–Protein interactions for RNA: ENST00000311388.7

DEPDC7-202, Transcript of DEP domain containing 7, humanhuman

TSL 1 (best) BASIC

Gene DEPDC7, Length 2,012 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-202ENST00000311388 KDM7AQ6ZMT4 941 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 RELL1Q8IUW5 271 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 NRDE2Q9H7Z3 1164 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 CNGB3Q9NQW8 809 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 TMPRSS4Q9NRS4 437 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 BCCIPQ9P287 314 aaKnown RBP eCLIP16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 PCDHB8Q9UN66 801 aa16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
DEPDC7-202ENST00000311388 SHOX2O60902 331 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 NR1D1P20393 614 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 TGM2P21980 687 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 ATP1A2P50993 1020 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 BCAR1P56945 870 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 ROR1Q01973 937 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 MORF4L2Q15014 288 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 TCTN1Q2MV58 587 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 ZNF771Q7L3S4 317 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 PRCCQ92733 491 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 TLCD1Q96CP7 247 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 FTHL17Q9BXU8 183 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 FOXP3Q9BZS1 431 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 USP29Q9HBJ7 922 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 CWC15Q9P013 229 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 DNAJB4Q9UDY4 337 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 USP3Q9Y6I4 520 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 M0QYT0 321 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 ENPP3O14638 875 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 CTCFP49711 727 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 MTFR1Q15390 333 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 FAM182AQ5T1J6 154 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 DARS2Q6PI48 645 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 DBF4BQ8NFT6 615 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 URGCPQ8TCY9 931 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 EPS8L3Q8TE67 593 aaKnown RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 CPT1BQ92523 772 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 CSPG4P5Q96PW8 444 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 RBM15Q96T37 977 aaKnown RBP eCLIP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 PAK6Q9NQU5 681 aaPredicted RBP16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 PIGVQ9NUD9 493 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 TMEM161AQ9NX61 479 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 HEY1Q9Y5J3 304 aa16.6■□□□□ 0.25
DEPDC7-202ENST00000311388 COL4A4P53420 1690 aaPredicted RBP16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 SYNJ2BP-COX16A0A087WUM0 186 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 H7C0C1 242 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 MAP3K6O95382 1288 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 ZBED1O96006 694 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 CAPN2P17655 700 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 RDXP35241 583 aaKnown RBP16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 ATP5OP48047 213 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 GAD2Q05329 585 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 SLC10A2Q12908 348 aaPredicted RBP16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 SKIDA1Q1XH10 827 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 ANKRD22Q5VYY1 191 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 HOOK3Q86VS8 718 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 THEM5Q8N1Q8 247 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 COX16Q9P0S2 106 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 STAP1Q9ULZ2 295 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 SHOC2Q9UQ13 582 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 MFHAS1Q9Y4C4 1052 aa16.59■□□□□ 0.25
DEPDC7-202ENST00000311388 TLDC2A0PJX2 215 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 TMEM189-UBE2V1I3L0A0 370 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 GOT1P17174 413 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 MAGEA4P43358 317 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 GBE1Q04446 702 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 NME3Q13232 169 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 BFSP2Q13515 415 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 TAB3Q8N5C8 712 aaPredicted RBP16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 NAT8LQ8N9F0 302 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 LRRN4Q8WUT4 740 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 PGM2Q96G03 612 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 C9orf72Q96LT7 481 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 DEFB118Q96PH6 123 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 ETNK2Q9NVF9 386 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 ZNF638Q14966 1978 aaKnown RBP16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 PATJQ8NI35 1801 aa16.58■□□□□ 0.25
DEPDC7-202ENST00000311388 SMIM23A6NLE4 172 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 LTFP02788 710 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 AMHP03971 560 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 AMPD1P23109 780 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 STIP1P31948 543 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 HPDP32754 393 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 OR1G1P47890 313 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 MAGOHP61326 146 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 YWHAHQ04917 246 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 DEUP1Q05D60 604 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 TTC19Q6DKK2 380 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 PM20D1Q6GTS8 502 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 PSTKQ8IV42 348 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 PPIL6Q8IXY8 311 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 SLC7A14Q8TBB6 771 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 ADAM32Q8TC27 787 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 SEZ6LQ9BYH1 1024 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 WDR6Q9NNW5 1121 aaKnown RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 SAYSD1Q9NPB0 183 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 DMAP1Q9NPF5 467 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 ANLNQ9NQW6 1124 aa16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 PRG3Q9Y2Y8 225 aaPredicted RBP16.58■□□□□ 0.24
DEPDC7-202ENST00000311388 TET1Q8NFU7 2136 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms