RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 PROSER3Q2NL68 480 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 MAGEC3Q8TD91 643 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 PDLIM2Q96JY6 352 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 TBC1D13Q9NVG8 400 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 CHD4Q14839 1912 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 HOXA2O43364 376 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 FAM220AQ7Z4H9 259 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 TBC1D10CQ8IV04 446 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 TPCN2Q8NHX9 752 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 CENPIQ92674 756 aaPredicted RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 C9orf72Q96LT7 481 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 NR5A2O00482 541 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 ATG7O95352 703 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 PRR29P0C7W0 189 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 CYP2A7P20853 494 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 CSNK2BP67870 215 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 NAB1Q13506 487 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 SKIV2LQ15477 1246 aaKnown RBP15.91■□□□□ 0.14
HCFC1-201ENST00000310441 WDR60Q8WVS4 1066 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 ANKEF1Q9NU02 776 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 FKBP14Q9NWM8 211 aa15.91■□□□□ 0.14
HCFC1-201ENST00000310441 UBE2QL1A1L167 161 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GYS1P13807 737 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 CACNB2Q08289 660 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GPAT2Q6NUI2 795 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 WDR93Q6P2C0 686 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ADPRHL2Q9NX46 363 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 POLR1DQ9Y2S0 133 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 PLA2G6O60733 806 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 HOXC6P09630 235 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 PTPN4P29074 926 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GMFBP60983 142 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 VAC14Q08AM6 782 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 DNAJC3Q13217 504 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF57Q68EA5 555 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 SLC25A41Q8N5S1 370 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 REEP2Q9BRK0 252 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ZCCHC17Q9NP64 241 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 HEY2Q9UBP5 337 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 DUSP12Q9UNI6 340 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 QTRT2Q9H974 415 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ABCA9Q8IUA7 1624 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 CRABP2P29373 138 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 FUT11Q495W5 492 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 FAM111AQ96PZ2 611 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GGT7Q9UJ14 662 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 FAM20BO75063 409 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 RXRBP28702 533 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 CCDC36Q8IYA8 594 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 BSNDQ8WZ55 320 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ZNF624Q9P2J8 865 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ZC3H13Q5T200 1668 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 A0A087WXM4 84 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 VAV1P15498 845 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 TFE3P19532 575 aaPredicted RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 STX12Q86Y82 276 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 PROX1Q92786 737 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 RUVBL2Q9Y230 463 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 NINQ8N4C6 2090 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GLP2RO95838 553 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 PRLRP16471 622 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 BCAT1P54687 386 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 SNAPC2Q13487 334 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 SAMD4BQ5PRF9 694 aaKnown RBP15.9■□□□□ 0.14
HCFC1-201ENST00000310441 ADHFE1Q8IWW8 467 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 DAPK2Q9UIK4 370 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 GTF3C4Q9UKN8 822 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 BTBD3Q9Y2F9 522 aa15.9■□□□□ 0.14
HCFC1-201ENST00000310441 OTUD4Q01804 1114 aaKnown RBP15.89■□□□□ 0.14
HCFC1-201ENST00000310441 BNC1Q01954 994 aa15.89■□□□□ 0.14
HCFC1-201ENST00000310441 BLOC1S5Q8TDH9 187 aa15.89■□□□□ 0.14
HCFC1-201ENST00000310441 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 CCDC182A6NF36 153 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 TEX33O43247 280 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 TAF6P49848 677 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 WASHC2DQ5SRD0 308 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 LAYNQ6UX15 382 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 CCDC185Q8N715 623 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 UBASH3BQ8TF42 649 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 HPS4Q9NQG7 708 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 ASS1P00966 412 aaKnown RBP15.89■□□□□ 0.13
HCFC1-201ENST00000310441 BCL2L14Q9BZR8 327 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 ARHGAP28Q9P2N2 729 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 AKR1B1P15121 316 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 CCT3P49368 545 aaKnown RBP15.89■□□□□ 0.13
HCFC1-201ENST00000310441 MYBPC2Q14324 1141 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 POMGNT2Q8NAT1 580 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 FAM120BQ96EK7 910 aaKnown RBP15.89■□□□□ 0.13
HCFC1-201ENST00000310441 EVA1BQ9NVM1 165 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 CRNNQ9UBG3 495 aaPredicted RBP15.89■□□□□ 0.13
HCFC1-201ENST00000310441 SLC25A27O95847 323 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 TSPAN19P0C672 248 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 HOXB8P17481 243 aaPredicted RBP15.89■□□□□ 0.13
HCFC1-201ENST00000310441 ACLYP53396 1101 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 SMTNL2Q2TAL5 461 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 SLFN11Q7Z7L1 901 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 EXOC3L1Q86VI1 746 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 RIBC2Q9H4K1 309 aa15.89■□□□□ 0.13
HCFC1-201ENST00000310441 TCF7L2Q9NQB0 619 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms