RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 SEPT12Q8IYM1 358 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 CPNE1Q99829 537 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 PHACTR1Q9C0D0 580 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 HMG20AQ9NP66 347 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 RRP1BQ14684 758 aaKnown RBP13.54□□□□□ -0.24
SNED1-201ENST00000310397 FAM98BQ52LJ0 330 aaKnown RBP13.54□□□□□ -0.24
SNED1-201ENST00000310397 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
SNED1-201ENST00000310397 KIAA1683Q9H0B3 1180 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 DDIT4Q9NX09 232 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 CHRM3P20309 590 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 SYTL3Q4VX76 610 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 SNX31Q8N9S9 440 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 ABHD8Q96I13 439 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 TBCBQ99426 244 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 C1orf50Q9BV19 199 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 CBX6O95503 412 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 NFYCQ13952 458 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 FAM172AQ8WUF8 416 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 OSCP1Q8WVF1 389 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 DNAJC18Q9H819 358 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 TECPR2O15040 1411 aa13.54□□□□□ -0.24
SNED1-201ENST00000310397 AKT1P31749 480 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SLC12A3P55017 1021 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SPANXN3Q5MJ09 141 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 TBCELQ5QJ74 424 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 FAM182BQ5T319 152 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 C4orf19Q8IY42 314 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 USE1Q9NZ43 259 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 FMN2Q9NZ56 1722 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 PDZK1P1A8MUH7 402 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 NR5A2O00482 541 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 GH1P01241 217 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 ATP6V1C1P21283 382 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 MAPK1P28482 360 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 HNRNPH3P31942 346 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 SLC25A41Q8N5S1 370 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 GMCL1P1Q8NEA9 526 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 MTERF3Q96E29 417 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 PAIP1Q9H074 479 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 C1orf167Q5SNV9 1468 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 CHD2O14647 1828 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 RRN3P2A6NIE6 340 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 FGFR2P21802 821 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SSTR1P30872 391 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 TAF6P49848 677 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 NCKAP1LP55160 1127 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 UBE3AQ05086 875 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 ITGA9Q13797 1035 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 C1DQ13901 141 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 PDK4Q16654 411 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 CYP51A1Q16850 503 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 GANCQ8TET4 914 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 TBC1D10AQ9BXI6 508 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SYTL2Q9HCH5 934 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 TRIM13O60858 407 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 CRABP2P29373 138 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 GSTT1P30711 240 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 N4BP2L1Q5TBK1 243 aaPredicted RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SVOPQ8N4V2 548 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 STKLD1Q8NE28 680 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 GANQ9H2C0 597 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 POLG2Q9UHN1 485 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 A0A087X0B3 334 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 CNOT3O75175 753 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 ATP4AP20648 1035 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SOX11P35716 441 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 C21orf59P57076 290 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 DGKDQ16760 1214 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 KCTD14Q9BQ13 255 aaPredicted RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 SMIM31A0A1B0GVY4 71 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 DYTNA2CJ06 578 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 RAG1P15918 1043 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 FUT11Q495W5 492 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 TRIM63Q969Q1 353 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 ENOPH1Q9UHY7 261 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 AP4E1Q9UPM8 1137 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 VPS26AO75436 327 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 KRT20P35900 424 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 ATP6AP1LQ52LC2 224 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 WDR59Q6PJI9 974 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 EID3Q8N140 333 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 STN1Q9H668 368 aaKnown RBP13.53□□□□□ -0.24
SNED1-201ENST00000310397 PARVBQ9HBI1 364 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 SESN1Q9Y6P5 492 aa13.53□□□□□ -0.24
SNED1-201ENST00000310397 C16orf72Q14CZ0 275 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 GPR162Q16538 588 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 MAGEC3Q8TD91 643 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 SGF29Q96ES7 293 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 MUC3BQ9H195 1237 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 EHD4Q9H223 541 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 DYRK4Q9NR20 520 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 PECAM1P16284 738 aaPredicted RBP13.52□□□□□ -0.24
SNED1-201ENST00000310397 PRIM2P49643 509 aa13.52□□□□□ -0.24
SNED1-201ENST00000310397 GTF3C2Q8WUA4 911 aaPredicted RBP13.52□□□□□ -0.24
SNED1-201ENST00000310397 DDX18Q9NVP1 670 aaKnown RBP13.52□□□□□ -0.24
SNED1-201ENST00000310397 MED26O95402 600 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 SLC25A27O95847 323 aa13.52□□□□□ -0.25
SNED1-201ENST00000310397 CYBBP04839 570 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms