RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KCTD15Q96SI1 283 aaPredicted RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 MAGEB5Q9BZ81 275 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 FZD10Q9ULW2 581 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 YJEFN3A6XGL0 299 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 E7ENQ6 273 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 M0QYT0 321 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 NBNO60934 754 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 ACSL3O95573 720 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 FYNP06241 537 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 USP17L7P0C7H9 530 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 COL6A1P12109 1028 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 BDNFP23560 247 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 RDXP35241 583 aaKnown RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 GPNMBQ14956 572 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 MAPRE1Q15691 268 aaKnown RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 KYNUQ16719 465 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 PSTKQ8IV42 348 aaKnown RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 COLGALT2Q8IYK4 626 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 TMEM209Q96SK2 561 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 RBM15Q96T37 977 aaKnown RBP eCLIP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 NRDE2Q9H7Z3 1164 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 TBC1D13Q9NVG8 400 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 TMEM161AQ9NX61 479 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 NOVA2Q9UNW9 492 aaKnown RBP22.12■■□□□ 1.13
ATG4D-201ENST00000309469 NAALADL1Q9UQQ1 740 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 HEY1Q9Y5J3 304 aa22.12■■□□□ 1.13
ATG4D-201ENST00000309469 TDRD15B5MCY1 1934 aaKnown RBP22.11■■□□□ 1.13
ATG4D-201ENST00000309469 FRMPD3Q5JV73 1810 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 H7C0C1 242 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 ZBED1O96006 694 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 ATP5OP48047 213 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 TSPY1Q01534 308 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 LEKR1Q6ZMV7 388 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 ZNF784Q8NCA9 323 aaPredicted RBP22.11■■□□□ 1.13
ATG4D-201ENST00000309469 NINJ2Q9NZG7 142 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 SHOC2Q9UQ13 582 aa22.11■■□□□ 1.13
ATG4D-201ENST00000309469 TMEM189-UBE2V1I3L0A0 370 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ENPP3O14638 875 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 CAPN9O14815 690 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ZFXP17010 805 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ACTN2P35609 894 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 CTCFP49711 727 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 YWHAHQ04917 246 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 RNASELQ05823 741 aaKnown RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 DEUP1Q05D60 604 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 C6orf118Q5T5N4 469 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 B4GALNT4Q76KP1 1039 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 DBF4BQ8NFT6 615 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 PGM2Q96G03 612 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 CSPG4P5Q96PW8 444 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 FARP1Q9Y4F1 1045 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 TLDC2A0PJX2 215 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 SHOX2O60902 331 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 OR1G1P47890 313 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ATP1A2P50993 1020 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 SKIDA1Q1XH10 827 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 PRCCQ92733 491 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 CAPS2Q9BXY5 557 aa22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ROPN1BQ9BZX4 212 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ELAC1Q9H777 363 aaKnown RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 ROPN1Q9HAT0 212 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 DMAP1Q9NPF5 467 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 PAK6Q9NQU5 681 aaPredicted RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 CWC15Q9P013 229 aaKnown RBP22.1■■□□□ 1.13
ATG4D-201ENST00000309469 TSC2P49815 1807 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 SYNJ2BP-COX16A0A087WUM0 186 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 MYCP01106 439 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-201ENST00000309469 LTFP02788 710 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 MAGEA4P43358 317 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 NME3Q13232 169 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 PLEKHG4Q58EX7 1191 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 PPIL6Q8IXY8 311 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 PYROXD2Q8N2H3 581 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 DEFB118Q96PH6 123 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 FAM193BQ96PV7 902 aaPredicted RBP22.09■■□□□ 1.13
ATG4D-201ENST00000309469 USP29Q9HBJ7 922 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 COX16Q9P0S2 106 aa22.09■■□□□ 1.13
ATG4D-201ENST00000309469 RASGRF2O14827 1237 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 PM20D1Q6GTS8 502 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 BHLHA9Q7RTU4 235 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 CTU1Q7Z7A3 348 aaKnown RBP22.08■■□□□ 1.13
ATG4D-201ENST00000309469 ARFGAP2Q8N6H7 521 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 SLC7A14Q8TBB6 771 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 EPS8L3Q8TE67 593 aaKnown RBP22.08■■□□□ 1.13
ATG4D-201ENST00000309469 IRGQQ8WZA9 623 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 CPT1BQ92523 772 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 TLCD1Q96CP7 247 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 SAYSD1Q9NPB0 183 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 PIGVQ9NUD9 493 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 RCOR3Q9P2K3 495 aaPredicted RBP22.08■■□□□ 1.13
ATG4D-201ENST00000309469 DNAJB4Q9UDY4 337 aa22.08■■□□□ 1.13
ATG4D-201ENST00000309469 BCLAF3A2AJT9 711 aaKnown RBP22.08■■□□□ 1.12
ATG4D-201ENST00000309469 PITPNM1O00562 1244 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 NCAM1P13591 858 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 HPDP32754 393 aaPredicted RBP22.08■■□□□ 1.12
ATG4D-201ENST00000309469 ARL4AP40617 200 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 MAGOHP61326 146 aaKnown RBP22.08■■□□□ 1.12
ATG4D-201ENST00000309469 NAT8LQ8N9F0 302 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 C9orf72Q96LT7 481 aa22.08■■□□□ 1.12
ATG4D-201ENST00000309469 PNPLA8Q9NP80 782 aa22.08■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms