RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 C1QTNF7Q9BXJ2 289 aa21.35■■□□□ 1.01
SH3RF3-201ENST00000309415 RIOX1Q9H6W3 641 aa21.35■■□□□ 1.01
SH3RF3-201ENST00000309415 USE1Q9NZ43 259 aa21.35■■□□□ 1.01
SH3RF3-201ENST00000309415 CYP2F1P24903 491 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 RRM2P31350 389 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 LRRC23Q53EV4 343 aaPredicted RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 SPOCD1Q6ZMY3 1216 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 CCDC60Q8IWA6 550 aaPredicted RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 CCDC134Q9H6E4 229 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 CPSF4O95639 269 aaKnown RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 CYP2A7P20853 494 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 PDGFDQ9GZP0 370 aaPredicted RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 MRPL17Q9NRX2 175 aaKnown RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 NRXN1Q9ULB1 1477 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 MAPTP10636 758 aaKnown RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 STX5Q13190 355 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 LRRC36Q1X8D7 754 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 TRIM69Q86WT6 500 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 OSCP1Q8WVF1 389 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 EVA1BQ9NVM1 165 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 NDOR1Q9UHB4 597 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 TSPAN16Q9UKR8 245 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 TAF6LQ9Y6J9 622 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 NFASCO94856 1347 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 TAL1P17542 331 aaPredicted RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 PTAR1Q7Z6K3 402 aaPredicted RBP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 DDX42Q86XP3 938 aaKnown RBP eCLIP21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 TMEM159Q96B96 161 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 MED8Q96G25 268 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 NAT9Q9BTE0 207 aa21.34■■□□□ 1.01
SH3RF3-201ENST00000309415 B2RBV5 119 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CCZ1BP86790 482 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CCZ1P86791 482 aaPredicted RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 MRPL28Q13084 256 aaKnown RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 IYDQ6PHW0 289 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 LRRC6Q86X45 466 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 LGI2Q8N0V4 545 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 EMC1Q8N766 993 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 B3GALNT2Q8NCR0 500 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 TRAPPC12Q8WVT3 735 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ERP27Q96DN0 273 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CTNNAL1Q9UBT7 734 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 LOC100653049A0A140TA62 436 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 KRT34O76011 436 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 POLR2EP19388 210 aaKnown RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 STRA8Q7Z7C7 330 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CYP4Z1Q86W10 505 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ATG4AQ8WYN0 398 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CELF6Q96J87 481 aaKnown RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ADAM2Q99965 735 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 DCLK3Q9C098 648 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 TDRKHQ9Y2W6 561 aaKnown RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 PRR23D1E9PI22 279 aaPredicted RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 RBP1P09455 135 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 PRR23D2P0DMB1 279 aaPredicted RBP21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 GLRBP48167 497 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 TERF2Q15554 542 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ALFQ53S48 1182 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 CNDP1Q96KN2 507 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 ELOVL6Q9H5J4 265 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 GTF2A1LQ9UNN4 478 aa21.33■■□□□ 1.01
SH3RF3-201ENST00000309415 PHF20L1A8MW92 1017 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 MTA2O94776 668 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 GTF2E2P29084 291 aaKnown RBP21.33■■□□□ 1
SH3RF3-201ENST00000309415 TUBP50607 506 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 SLC47A2Q86VL8 602 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 GPAMQ9HCL2 828 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 UMODL1Q5DID0 1318 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 RPS7P62081 194 aaKnown RBP21.33■■□□□ 1
SH3RF3-201ENST00000309415 DEFB115Q30KQ5 88 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 ZDHHC17Q8IUH5 632 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 CENPLQ8N0S6 344 aaPredicted RBP21.33■■□□□ 1
SH3RF3-201ENST00000309415 ZNF473Q8WTR7 871 aaKnown RBP21.33■■□□□ 1
SH3RF3-201ENST00000309415 FAM111AQ96PZ2 611 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 ASB7Q9H672 318 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 VIPAS39Q9H9C1 493 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 VPS51Q9UID3 782 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 TNS2Q63HR2 1409 aa21.33■■□□□ 1
SH3RF3-201ENST00000309415 VGLL4Q14135 290 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 SUGP1Q8IWZ8 645 aaKnown RBP21.32■■□□□ 1
SH3RF3-201ENST00000309415 RGL4Q8IZJ4 473 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 MIEF1Q9NQG6 463 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 RAD54BQ9Y620 910 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 HOMEZQ8IX15 550 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 FHDC1Q9C0D6 1143 aaPredicted RBP21.32■■□□□ 1
SH3RF3-201ENST00000309415 CYP4F12Q9HCS2 524 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 IMPAD1Q9NX62 359 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 ZNF229Q9UJW7 825 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 TMCC3Q9ULS5 477 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 PIK3C2BO00750 1634 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 DIP2CQ9Y2E4 1556 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 CCDC159P0C7I6 412 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 CSTF3Q12996 717 aaKnown RBP21.32■■□□□ 1
SH3RF3-201ENST00000309415 CCDC142Q17RM4 750 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 TRIM60Q495X7 471 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 CCDC149Q6ZUS6 474 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 COLGALT1Q8NBJ5 622 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 AHSPQ9NZD4 102 aa21.32■■□□□ 1
SH3RF3-201ENST00000309415 UBP1Q9NZI7 540 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms