RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 PCDHB4Q9Y5E5 795 aa20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 UTP18Q9Y5J1 556 aaKnown RBP eCLIP20.81■□□□□ 0.92
PDZRN3-202ENST00000308537 CACNG3O60359 315 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 ADAM23O75077 832 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 SETSIPP0DME0 302 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 BRD2P25440 801 aaKnown RBP20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 GRIA2P42262 883 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 YWHAGP61981 247 aaKnown RBP eCLIP20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 MRPS21P82921 87 aaKnown RBP20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 KDSRQ06136 332 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 ADIGQ0VDE8 80 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 CNGA2Q16280 664 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 PMF1Q6P1K2 205 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 PRR23BQ6ZRT6 265 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 RASSF3Q86WH2 238 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 RBBP8NLQ8NC74 664 aaPredicted RBP20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 RMDN1Q96DB5 314 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 ZDHHC4Q9NPG8 344 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 LMBRD1Q9NUN5 540 aa20.8■□□□□ 0.92
PDZRN3-202ENST00000308537 PLXND1Q9Y4D7 1925 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 YJEFN3A6XGL0 299 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 E7ENQ6 273 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 SGK1O00141 431 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 APODP05090 189 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 RETP07949 1114 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 RALAP11233 206 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 RPL34P49207 117 aaKnown RBP20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 DAOAP59103 153 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 APBA1Q02410 837 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 EFEMP1Q12805 493 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 CRY1Q16526 586 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 DPCR1Q3MIW9 517 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 MIB1Q86YT6 1006 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 CCDC33Q8N5R6 958 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 FAM160A2Q8N612 972 aaPredicted RBP20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 ALLCQ8N6M5 410 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 TERB1Q8NA31 727 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 HINFPQ9BQA5 517 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 HESX1Q9UBX0 185 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 FBXO10Q9UK96 956 aa20.79■□□□□ 0.92
PDZRN3-202ENST00000308537 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 AXIN1O15169 862 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 APBB3O95704 486 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 CISD3P0C7P0 127 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 CCDC192P0DO97 292 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 TNFRSF4P43489 277 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 ANO4Q32M45 955 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 DPY19L2P1Q6NXN4 242 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 GJB7Q6PEY0 223 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 KBTBD6Q86V97 674 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 FAM217AQ8IXS0 508 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 ARHGAP18Q8N392 663 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 MLKLQ8NB16 471 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 SECISBP2LQ93073 1101 aaKnown RBP20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 CDK5RAP1Q96SZ6 601 aaKnown RBP20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 CD248Q9HCU0 757 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 RASAL2Q9UJF2 1139 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 NCOR2Q9Y618 2525 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 GON4LQ3T8J9 2241 aa20.78■□□□□ 0.92
PDZRN3-202ENST00000308537 BECN2A8MW95 431 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 GFRA2O00451 464 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 RPP40O75818 363 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 PENKP01210 267 aaPredicted RBP20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TYRP14679 529 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 COG7P83436 770 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 CETN1Q12798 172 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 FYB2Q5VWT5 728 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 BSPRYQ5W0U4 402 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TRIM65Q6PJ69 517 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TPGS1Q6ZTW0 290 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TOGARAM2Q6ZUX3 1019 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TADA2BQ86TJ2 420 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 TXNDC5Q8NBS9 432 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 CCDC26Q8TAB7 109 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 ZC3H10Q96K80 434 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 CRACR2AQ9BSW2 395 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 LRRC4Q9HBW1 653 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 ACP6Q9NPH0 428 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 CNGB3Q9NQW8 809 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 DLL3Q9NYJ7 618 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 MARCH2Q9P0N8 246 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 DEC1Q9P2X7 70 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 LSM7Q9UK45 103 aaKnown RBP20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 STARD13Q9Y3M8 1113 aa20.77■□□□□ 0.92
PDZRN3-202ENST00000308537 NUP205Q92621 2012 aa20.77■□□□□ 0.91
PDZRN3-202ENST00000308537 PRRT4C9JH25 899 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 NEDD8-MDP1E9PL57 170 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 SLC9A1P19634 815 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 TIE1P35590 1138 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 GPD2P43304 727 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 RGS7P49802 495 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 SLC8A3P57103 927 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 GOLGA8FQ08AF8 430 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 GOLGA8DPQ0D2H9 430 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 SPEM2Q0P670 501 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 TRIP4Q15650 581 aaPredicted RBP20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 HSF5Q4G112 596 aaPredicted RBP20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 MDGA1Q8NFP4 955 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 OLIG1Q8TAK6 271 aa20.76■□□□□ 0.91
PDZRN3-202ENST00000308537 CLEC4CQ8WTT0 213 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms