RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 RCOR2Q8IZ40 523 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 FBXO22Q8NEZ5 403 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 RIN2Q8WYP3 895 aaPredicted RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 HSPH1Q92598 858 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 RBM41Q96IZ5 413 aaKnown RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 C8orf48Q96LL4 319 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 NAP1L3Q99457 506 aaPredicted RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 NPY6RQ99463 290 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 HINFPQ9BQA5 517 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 HERC2P3Q9BVR0 1158 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 HEMGNQ9BXL5 484 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 OSBPL8Q9BZF1 889 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 POPDC2Q9HBU9 364 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 GPATCH2LQ9NWQ4 482 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 DDX56Q9NY93 547 aaKnown RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 ZMYND8Q9ULU4 1186 aaPredicted RBP7.27□□□□□ -1.25
PTCD2-201ENST00000308077 SLC27A5Q9Y2P5 690 aa7.27□□□□□ -1.25
PTCD2-201ENST00000308077 hCG_1818297A0A087WSY0 165 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 LRRD1A4D1F6 860 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 C2CD2LO14523 706 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SART1O43290 800 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ZMYND10O75800 440 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 H2AFXP16104 143 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 KDELR1P24390 212 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 NOS2P35228 1153 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 PTPN7P35236 360 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CDKN2BP42772 138 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 MAGEA10P43363 369 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 MAGEA11P43364 429 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ARSEP51690 589 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 VSNL1P62760 191 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ROR1Q01973 937 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 DSG1Q02413 1049 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 IFRD2Q12894 506 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SMC1AQ14683 1233 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CLUL1Q15846 466 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CYP1B1Q16678 543 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CA9Q16790 459 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 AAK1Q2M2I8 961 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SLC25A52Q3SY17 297 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ZFYVE27Q5T4F4 411 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SLC8B1Q6J4K2 584 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 C8orf74Q6P047 294 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TTC27Q6P3X3 843 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 PSRC1Q6PGN9 363 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CMASQ8NFW8 434 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 GPR152Q8TDT2 470 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 IRGQQ8WZA9 623 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 HERVK_113Q902F9 699 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TMEM169Q96HH4 297 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CLSTN3Q9BQT9 956 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SNRNP25Q9BV90 132 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 PLVAPQ9BX97 442 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 MAGEB5Q9BZ81 275 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ZNF446Q9NWS9 450 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SPG21Q9NZD8 308 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 RAB21Q9UL25 225 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 R3HDM2Q9Y2K5 976 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 BACE2Q9Y5Z0 518 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 MUC3AQ02505 3323 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TARSL2A2RTX5 802 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 LCHNA4D1U4 455 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ZSCAN5CA6NGD5 496 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TRIM66O15016 1216 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 PRPSAP2O60256 369 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 PHF2O75151 1096 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ENDOD1O94919 500 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 HAPLN1P10915 354 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 OR1D2P34982 312 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 GLUD2P49448 558 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 COPS2P61201 443 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 USP46P62068 366 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TAZQ16635 292 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ZC3H12AQ5D1E8 599 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 TFDP3Q5H9I0 405 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 KAZNQ674X7 775 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SCYL2Q6P3W7 929 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 STRADAQ7RTN6 431 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 DDX53Q86TM3 631 aaKnown RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 CCDC185Q8N715 623 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 C12orf50Q8NA57 414 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 ADAM32Q8TC27 787 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SPPL2BQ8TCT7 592 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 C1orf54Q8WWF1 131 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 AUTS2Q8WXX7 1259 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 EDEM1Q92611 657 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 OXCT2Q9BYC2 517 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.26□□□□□ -1.25
PTCD2-201ENST00000308077 AMACRQ9UHK6 382 aa7.26□□□□□ -1.25
PTCD2-201ENST00000308077 SYNJ2BP-COX16A0A087WUM0 186 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 GOLGA6L10A0A0M3HER8 536 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 BHMG1C9JSJ3 638 aaPredicted RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 M0QYT0 321 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MDM4O15151 490 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 HEXIM1O94992 359 aaKnown RBP7.25□□□□□ -1.25
PTCD2-201ENST00000308077 MYBL2P10244 700 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 NCAM1P13591 858 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 CDH6P55285 790 aa7.25□□□□□ -1.25
PTCD2-201ENST00000308077 SMARCB1Q12824 385 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms