RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 GDPD5Q8WTR4 605 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 BSNDQ8WZ55 320 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 NAT9Q9BTE0 207 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 MRIQ9BWK5 157 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 EML4Q9HC35 981 aaKnown RBP13.71□□□□□ -0.21
DDX54-201ENST00000306014 SYNPO2Q9UMS6 1093 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 ORC6Q9Y5N6 252 aa13.71□□□□□ -0.21
DDX54-201ENST00000306014 UBA6A0AVT1 1052 aaPredicted RBP13.71□□□□□ -0.22
DDX54-201ENST00000306014 ANGPT2O15123 496 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 SERPINE1P05121 402 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 CNTFP26441 200 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 ACADSBP45954 432 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 PCSK7Q16549 785 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 CYP1B1Q16678 543 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 BNC2Q6ZN30 1099 aaPredicted RBP13.71□□□□□ -0.22
DDX54-201ENST00000306014 POLNQ7Z5Q5 900 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 DAW1Q8N136 415 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 USP13Q92995 863 aaPredicted RBP13.71□□□□□ -0.22
DDX54-201ENST00000306014 THAP11Q96EK4 314 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 ARHGEF38Q9NXL2 777 aa13.71□□□□□ -0.22
DDX54-201ENST00000306014 WNT10BO00744 389 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 CLPTM1O96005 669 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 CCNE2O96020 404 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 CRADDP78560 199 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 GRAMD4Q6IC98 578 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 KCNT2Q6UVM3 1135 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 SH3BP5LQ7L8J4 393 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 CCNJLQ8IV13 435 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 NUP93Q8N1F7 819 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 UNKQ9C0B0 810 aaKnown RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 DENND2DQ9H6A0 471 aaPredicted RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 NMRK1Q9NWW6 199 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 KLK14Q9P0G3 267 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 KIAA1257Q9ULG3 409 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 A0A087WZ62 844 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 VTNP04004 478 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 GFAPP14136 432 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 TFE3P19532 575 aaPredicted RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 MMP8P22894 467 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 MGAT1P26572 445 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 MGAT5Q09328 741 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 SEL1L3Q68CR1 1132 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.7□□□□□ -0.22
DDX54-201ENST00000306014 JADE3Q92613 823 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 FDXACB1Q9BRP7 624 aaPredicted RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 CHKBQ9Y259 395 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 ZC3H4Q9UPT8 1303 aaKnown RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 ASB14A6NK59 587 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 AMPD1P23109 780 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 SERPINB8P50452 374 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 CACNB2Q08289 660 aaPredicted RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 LY6KQ17RY6 165 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 LRRC40Q9H9A6 602 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 EFCAB1Q9HAE3 211 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 IARS2Q9NSE4 1012 aaKnown RBP13.7□□□□□ -0.22
DDX54-201ENST00000306014 UBP1Q9NZI7 540 aa13.7□□□□□ -0.22
DDX54-201ENST00000306014 E2F6O75461 281 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 MTA2O94776 668 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 NCAM1P13591 858 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 RAG1P15918 1043 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 WDR4P57081 412 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 CCDC15Q0P6D6 951 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 PDAP1Q13442 181 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 PLEKHA7Q6IQ23 1121 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 RIPOR1Q6ZS17 1223 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 IFT43Q96FT9 208 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 MAGEB5Q9BZ81 275 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 CCDC90BQ9GZT6 254 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 CYP3A43Q9HB55 503 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 SARS2Q9NP81 518 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 APPL1Q9UKG1 709 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 PRPF4O43172 522 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDX54-201ENST00000306014 MYL3P08590 195 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 LAMB3Q13751 1172 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 CYLC2Q14093 348 aaPredicted RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 TDRD5Q8NAT2 981 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 JOSD2Q8TAC2 188 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 PIWIL2Q8TC59 973 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 ETNK2Q9NVF9 386 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 PACSIN3Q9UKS6 424 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 BARX2Q9UMQ3 279 aaPredicted RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 KCNK1O00180 336 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 GSC2O15499 205 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 CYP2C8P10632 490 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 ECHS1P30084 290 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 ATPAF2Q8N5M1 289 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 NCLNQ969V3 563 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 NMUR2Q9GZQ4 415 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 ARHGEF3Q9NR81 526 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 RHBDL2Q9NX52 303 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.69□□□□□ -0.22
DDX54-201ENST00000306014 ATP8B3O60423 1300 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 UMODL1Q5DID0 1318 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 PMPCBO75439 489 aa13.69□□□□□ -0.22
DDX54-201ENST00000306014 LYPLA2O95372 231 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms