RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 ABLIM1O14639 778 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 RIPK1Q13546 671 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 SPDYE7PQ495Y7 208 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 LACTB2Q53H82 288 aaPredicted RBP13.22□□□□□ -0.29
COL3A1-201ENST00000304636 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 CHST13Q8NET6 341 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 OSCP1Q8WVF1 389 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 TMEM176AQ96HP8 235 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 ERAP1Q9NZ08 941 aa13.22□□□□□ -0.29
COL3A1-201ENST00000304636 RNF103O00237 685 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 VWA5AO00534 786 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 CYP2F1P24903 491 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 TAF6P49848 677 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 C21orf59P57076 290 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ORC1Q13415 861 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ZNF268Q14587 947 aaPredicted RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 SNX31Q8N9S9 440 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ZNF483Q8TF39 744 aaPredicted RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 PYDC1Q8WXC3 89 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 CPNE1Q99829 537 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 KCTD14Q9BQ13 255 aaPredicted RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 CYP4F12Q9HCS2 524 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 LZTS3O60299 673 aaPredicted RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 EFCAB14O75071 495 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 SLITRK3O94933 977 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 GH1P01241 217 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 CYP1A2P05177 515 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 RAD23AP54725 363 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 MYL6P60660 151 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 NCALDP61601 193 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 LRRC74AQ0VAA2 488 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ATP1A4Q13733 1029 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 PKN3Q6P5Z2 889 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 FOXR2Q6PJQ5 311 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 LRRC39Q96DD0 335 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 CDRT15Q96T59 188 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 TMEM245Q9H330 911 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 VANGL2Q9ULK5 521 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 AFF2P51816 1311 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ENTPD5O75356 428 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 F9P00740 461 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ATP6V1B2P21281 511 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 PTPN11Q06124 597 aaPredicted RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 ITPK1Q13572 414 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 IL31Q6EBC2 164 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 MARK2Q7KZI7 788 aaKnown RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 KCNK18Q7Z418 384 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 SH3GL1Q99961 368 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 DDIT4Q9NX09 232 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 GPRC5DQ9NZD1 345 aa13.21□□□□□ -0.29
COL3A1-201ENST00000304636 TRMT6Q9UJA5 497 aaKnown RBP13.21□□□□□ -0.29
COL3A1-201ENST00000304636 SMIM31A0A1B0GVY4 71 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 PRR23D1E9PI22 279 aaPredicted RBP13.21□□□□□ -0.3
COL3A1-201ENST00000304636 CLOCKO15516 846 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 PRR23D2P0DMB1 279 aaPredicted RBP13.21□□□□□ -0.3
COL3A1-201ENST00000304636 HOMEZQ8IX15 550 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 PRELID2Q8N945 189 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 OR6J1Q8NGC5 347 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 OTULINQ96BN8 352 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 BDH2Q9BUT1 245 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 RMND5AQ9H871 391 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 DIP2BQ9P265 1576 aa13.21□□□□□ -0.3
COL3A1-201ENST00000304636 DCXO43602 365 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 DDHD2O94830 711 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 PGK2P07205 417 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 OCM2P0CE71 109 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 OCMP0CE72 109 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 TSHRP16473 764 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 TCF7P36402 384 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 NME5P56597 212 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ACCSLQ4AC99 568 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ATP6AP1LQ52LC2 224 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 SPANXN3Q5MJ09 141 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 TIGD7Q6NT04 549 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 TSHZ1Q6ZSZ6 1077 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 VPS33AQ96AX1 596 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 AGO4Q9HCK5 861 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 UBQLN1Q9UMX0 589 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ANKRD6Q9Y2G4 727 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 RAD54BQ9Y620 910 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 ADAMTS13Q76LX8 1427 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 C1orf232A0A0U1RR37 186 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 NCAM2O15394 837 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 SGO1Q5FBB7 561 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 SNX32Q86XE0 403 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 DCUN1D5Q9BTE7 237 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 DMAP1Q9NPF5 467 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 CLTCQ00610 1675 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 APOC4-APOC2K7ER74 178 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 APOC2P02655 101 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 QPCTQ16769 361 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 LUZP2Q86TE4 346 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 OTUD5Q96G74 571 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 GRIP2Q9C0E4 1043 aa13.2□□□□□ -0.3
COL3A1-201ENST00000304636 CAB39Q9Y376 341 aaPredicted RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 COPG1Q9Y678 874 aaKnown RBP13.2□□□□□ -0.3
COL3A1-201ENST00000304636 PHGDHO43175 533 aaKnown RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms