RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 DENND1BQ6P3S1 775 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SCUBE1Q8IWY4 988 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SUGP1Q8IWZ8 645 aaKnown RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 SYT15Q9BQS2 421 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 REXO2Q9Y3B8 237 aaKnown RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 SUPT7LO94864 414 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SLC6A3Q01959 620 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 DSG1Q02413 1049 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 MFSD10Q14728 455 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 PKN2Q16513 984 aaKnown RBP16.86■□□□□ 0.29
BRD3-201ENST00000303407 BMT2Q1RMZ1 405 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 ZSWIM2Q8NEG5 633 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 SCUBE2Q9NQ36 999 aa16.86■□□□□ 0.29
BRD3-201ENST00000303407 TBC1D12O60347 775 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 NUMBP49757 651 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 MGAT5Q09328 741 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 FOXR1Q6PIV2 292 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 ZNF410Q86VK4 478 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CLEC4FQ8N1N0 589 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 TDRD5Q8NAT2 981 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 EDEM1Q92611 657 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 C10orf88Q9H8K7 445 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 STX7O15400 261 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 DGKZQ13574 1117 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 KRT72Q14CN4 511 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 TCP10LQ8TDR4 215 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 TRIM45Q9H8W5 580 aaPredicted RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 GBA2Q9HCG7 927 aaPredicted RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 THRAP10827 490 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CPA3P15088 417 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 AMPD1P23109 780 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 NCKAP1LP55160 1127 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CDH18Q13634 790 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 VGLL4Q14135 290 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CTXN3Q4LDR2 81 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 UGT3A1Q6NUS8 523 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 SLC9A9Q8IVB4 645 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 GPC2Q8N158 579 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 HTR3CQ8WXA8 447 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 PGM2Q96G03 612 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 APOPT1Q96IL0 206 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 TEX12Q9BXU0 123 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 VPS9D1Q9Y2B5 631 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 MROH7Q68CQ1 1323 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 EIF1ADQ8N9N8 165 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 CCDC126Q96EE4 140 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CTNNAL1Q9UBT7 734 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 VAV3Q9UKW4 847 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 DRG1Q9Y295 367 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 NFASCO94856 1347 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 E5RJQ4 531 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 SHBGP04278 402 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 HNRNPH3P31942 346 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 ALDH7A1P49419 539 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 SEL1L3Q68CR1 1132 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 PDPK2PQ6A1A2 396 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 YAF2Q8IY57 180 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 RAB42Q8N4Z0 105 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 CELF6Q96J87 481 aaKnown RBP16.85■□□□□ 0.29
BRD3-201ENST00000303407 FAR2Q96K12 515 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 HSD17B14Q9BPX1 270 aa16.85■□□□□ 0.29
BRD3-201ENST00000303407 RNF225M0QZC1 329 aaPredicted RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 NCAM2O15394 837 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 ATP6V1G2O95670 118 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 ZSCAN5DPP0CG00 497 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 MYBL2P10244 700 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 PGAM1P18669 254 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 MPP3Q13368 585 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 UGCGQ16739 394 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 KBTBD12Q3ZCT8 623 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 CELF3Q5SZQ8 465 aaKnown RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 TATDN1Q6P1N9 297 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 CYP4F12Q9HCS2 524 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 CRLS1Q9UJA2 301 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 NCF1BA6NI72 391 aaPredicted RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 NCF1CA8MVU1 366 aaPredicted RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 MPOP05164 745 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 NCF1P14598 390 aaPredicted RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 PPP3CCP48454 512 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 NR2C2P49116 596 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 FMO1Q01740 532 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 NT5DC4Q86YG4 428 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 EIF2AQ9BY44 585 aaKnown RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 PIH1D1Q9NWS0 290 aaKnown RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 ETS1P14921 441 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 KDELR1P24390 212 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 MGAT1P26572 445 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 RIOX2Q8IUF8 465 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 SLC2A14Q8TDB8 520 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 BHMTQ93088 406 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 LGALS2P05162 132 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 STX5Q13190 355 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 SHROOM1Q2M3G4 852 aaPredicted RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 IRF2BP2Q7Z5L9 587 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 ZCWPW1Q9H0M4 648 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 NT5MQ9NPB1 228 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 DISP2A7MBM2 1401 aa16.84■□□□□ 0.29
BRD3-201ENST00000303407 PARP4Q9UKK3 1724 aaKnown RBP16.84■□□□□ 0.29
BRD3-201ENST00000303407 MYO1GB0I1T2 1018 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms