RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 SELENOOQ9BVL4 669 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 WDR6Q9NNW5 1121 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 ANLNQ9NQW6 1124 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ASAH2Q9NR71 780 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 TLR8Q9NR97 1041 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 ABCC13Q9NSE7 274 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 UVRAGQ9P2Y5 699 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 UXTQ9UBK9 157 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 PAXBP1Q9Y5B6 917 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 BRWD1Q9NSI6 2320 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 H3BQ06 376 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 SART1O43290 800 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 GREM1O60565 184 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 BUB1BO60566 1050 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 TLR5O60602 858 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 NCAM1P13591 858 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 TCF4P15884 667 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PDGFRAP16234 1089 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CEBPBP17676 345 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PTPN9P43378 593 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PPP3CCP48454 512 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PSEN1P49768 467 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 TUBP50607 506 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ZNF143P52747 638 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 HDAC4P56524 1084 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ITIH3Q06033 890 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CBX2Q14781 532 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 TEAD2Q15562 447 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 C15orf59Q2T9L4 293 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 DCAF6Q58WW2 860 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 DAB2IPQ5VWQ8 1189 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 SLFN11Q7Z7L1 901 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 LRRC57Q8N9N7 239 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PDZD8Q8NEN9 1154 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 TPCN2Q8NHX9 752 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ZNF564Q8TBZ8 553 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 DQX1Q8TE96 717 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 FAM149B1Q96BN6 582 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 PGAP3Q96FM1 320 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 TBCBQ99426 244 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 GOLPH3Q9H4A6 298 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 UBE2ZQ9H832 354 aaPredicted RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 TRMT1Q9NXH9 659 aaKnown RBP9.92□□□□□ -0.82
RFX3-201ENST00000302303 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.92□□□□□ -0.82
RFX3-201ENST00000302303 EHD2Q9NZN4 543 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 TRPM5Q9NZQ8 1165 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 SFMBT1Q9UHJ3 866 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 ZKSCAN5Q9Y2L8 839 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 CAPN6Q9Y6Q1 641 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 MYO16Q9Y6X6 1858 aa9.92□□□□□ -0.82
RFX3-201ENST00000302303 GRID2IPA4D2P6 1211 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 FANCGO15287 622 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 CCP110O43303 1012 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 BUB1O43683 1085 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 IGLV3-27P01718 113 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 KIF5AQ12840 1032 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 CLUL1Q15846 466 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 SLC25A52Q3SY17 297 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 BTBD8Q5XKL5 378 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 TXNRD3NBQ6F5E7 133 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 KLHDC10Q6PID8 442 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 PDZD4Q76G19 769 aaPredicted RBP9.91□□□□□ -0.82
RFX3-201ENST00000302303 KIAA1328Q86T90 577 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 TAC4Q86UU9 113 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 RHOT2Q8IXI1 618 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 ELMOD1Q8N336 334 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 ARHGAP18Q8N392 663 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 NIPA2Q8N8Q9 360 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 ARL14EPQ8N8R7 260 aaPredicted RBP9.91□□□□□ -0.82
RFX3-201ENST00000302303 MAB21L3Q8N8X9 362 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 LEMD2Q8NC56 503 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.91□□□□□ -0.82
RFX3-201ENST00000302303 ADAM32Q8TC27 787 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 SLC39A13Q96H72 371 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 LRRC3BQ96PB8 259 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 KLF16Q9BXK1 252 aaPredicted RBP9.91□□□□□ -0.82
RFX3-201ENST00000302303 MAGEB5Q9BZ81 275 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 ATXN3LQ9H3M9 355 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 SMOC2Q9H3U7 446 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 POMKQ9H5K3 350 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 MRPL47Q9HD33 250 aaKnown RBP9.91□□□□□ -0.82
RFX3-201ENST00000302303 LZTFL1Q9NQ48 299 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 PRDM6Q9NQX0 595 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 CTTNBP2NLQ9P2B4 639 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 ANAPC7Q9UJX3 599 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 SCINQ9Y6U3 715 aa9.91□□□□□ -0.82
RFX3-201ENST00000302303 IRAK2O43187 625 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 MSI1O43347 362 aaKnown RBP9.9□□□□□ -0.82
RFX3-201ENST00000302303 MBTPS2O43462 519 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 LRCH4O75427 683 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 PROSCO94903 275 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 IPO7O95373 1038 aaKnown RBP9.9□□□□□ -0.82
RFX3-201ENST00000302303 MOCS3O95396 460 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 TRUB2O95900 331 aaKnown RBP9.9□□□□□ -0.82
RFX3-201ENST00000302303 KLKB1P03952 638 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 GPD1P21695 349 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 CDC25CP30307 473 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 SLC7A9P82251 487 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 TAF12Q16514 161 aa9.9□□□□□ -0.82
RFX3-201ENST00000302303 HECTD3Q5T447 861 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms