RNA–Protein interactions for RNA: ENST00000301453.7

OTUB1-201, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,493 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-201ENST00000301453 GRIA1P42261 906 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 MAGEA6P43360 314 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 BCAR1P56945 870 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 CHI3L2Q15782 390 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 AMHR2Q16671 573 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 MDH1BQ5I0G3 518 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 NOL9Q5SY16 702 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 WDR78Q5VTH9 848 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 AEBP2Q6ZN18 517 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 RFX8Q6ZV50 586 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 ARID3BQ8IVW6 561 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 SIGLEC10Q96LC7 697 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 C7orf26Q96N11 449 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 ACAP3Q96P50 834 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 SYT15Q9BQS2 421 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 IQCGQ9H095 443 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 VRTNQ9H8Y1 702 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 NGRNQ9NPE2 291 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 MARCOQ9UEW3 520 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 BCLAF3A2AJT9 711 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 NOP56O00567 594 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 APOL1O14791 398 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 ZBED1O96006 694 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 APOEP02649 317 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 KITP10721 976 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 VHLP40337 213 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 TMPRSS15P98073 1019 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 SLC10A2Q12908 348 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 PMF1Q6P1K2 205 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 CCDC62Q6P9F0 684 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 LCLAT1Q6UWP7 414 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.91■□□□□ 0.32e-8■■■□□ 18.3
OTUB1-201ENST00000301453 E2F7Q96AV8 911 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 SNRNP25Q9BV90 132 aaKnown RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 RNPEPQ9H4A4 650 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 CYP3A43Q9HB55 503 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 KCNK4Q9NYG8 393 aa16.91■□□□□ 0.3
OTUB1-201ENST00000301453 BARX2Q9UMQ3 279 aaPredicted RBP16.91■□□□□ 0.3
OTUB1-201ENST00000301453 B2RBV5 119 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 TRDMT1O14717 391 aaKnown RBP16.9■□□□□ 0.3
OTUB1-201ENST00000301453 MAP3K13O43283 966 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 MAGEA3P43357 314 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 CCDC6Q16204 474 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 MUM1Q2TAK8 710 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 OLFML1Q6UWY5 402 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 FAM172AQ8WUF8 416 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 UCMAQ8WVF2 138 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 SPATA33Q96N06 139 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 YIPF3Q9GZM5 350 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 NR2E3Q9Y5X4 410 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 USP2O75604 605 aaPredicted RBP16.9■□□□□ 0.3
OTUB1-201ENST00000301453 ENO1P06733 434 aaKnown RBP16.9■□□□□ 0.3
OTUB1-201ENST00000301453 PGM1P36871 562 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 INCA1Q0VD86 236 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 PDK2Q15119 407 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 MROH9Q5TGP6 573 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 SCG3Q8WXD2 468 aaKnown RBP16.9■□□□□ 0.3
OTUB1-201ENST00000301453 KLC2Q9H0B6 622 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 MMADHCQ9H3L0 296 aaPredicted RBP16.9■□□□□ 0.3
OTUB1-201ENST00000301453 PDZD7Q9H5P4 517 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 PCMTD2Q9NV79 361 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 GGA3Q9NZ52 723 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 WASF2Q9Y6W5 498 aa16.9■□□□□ 0.3
OTUB1-201ENST00000301453 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 H3BRJ5 948 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 FZD9O00144 591 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 TGM2P21980 687 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 ATICP31939 592 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 MRPS35P82673 323 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 SLC34A1Q06495 639 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 THOC5Q13769 683 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 TSNAXIP1Q2TAA8 658 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 C11orf91Q3C1V1 193 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 BOLA3Q53S33 107 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 PPP1R26Q5T8A7 1209 aaPredicted RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 ZCCHC23Q6ZST2 131 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 APOBEC3FQ8IUX4 373 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 MAP7D3Q8IWC1 876 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 SCUBE3Q8IX30 993 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 ADGRF2Q8IZF7 708 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 UNC5BQ8IZJ1 945 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 RBM15BQ8NDT2 890 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 CXCL16Q9H2A7 254 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 PPARGC1AQ9UBK2 798 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 NME7Q9Y5B8 376 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 A0A087WZ62 844 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 FAM159BA6NKW6 160 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 ENO4A6NNW6 628 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 SNNO75324 88 aaPredicted RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 ATXN1P54253 815 aaKnown RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 AQP5P55064 265 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 HDAC4P56524 1084 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 IGBP1P78318 339 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 GBE1Q04446 702 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 VGLL4Q14135 290 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 PPP6R3Q5H9R7 873 aaPredicted RBP16.89■□□□□ 0.29
OTUB1-201ENST00000301453 LRRC74BQ6ZQY2 392 aa16.89■□□□□ 0.29
OTUB1-201ENST00000301453 TTC30AQ86WT1 665 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms