RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ZFYVE28Q9HCC9 887 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 KANSL1LA0AUZ9 987 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 FAM196BA6NMK8 535 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 TTC33Q6PID6 262 aaPredicted RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 SHC4Q6S5L8 630 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 C3orf62Q6ZUJ4 267 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 RASGRP2Q7LDG7 609 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 GSPT2Q8IYD1 628 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 CNPY3Q9BT09 278 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 IGFLR1Q9H665 355 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.41□□□□□ -0.424e-18■□□□□ 11.2
PCF11-201ENST00000298281 PLA2G4CQ9UP65 541 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 BAZ2BQ9UIF8 2168 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 RARBP10826 455 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 AKR1B1P15121 316 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 GRSF1Q12849 480 aaKnown RBP eCLIP12.41□□□□□ -0.42
PCF11-201ENST00000298281 FAM182BQ5T319 152 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 C3orf20Q8ND61 904 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 CSGALNACT1Q8TDX6 532 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 CAPSLQ8WWF8 208 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 SYN2Q92777 582 aaPredicted RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 PCDHGB3Q9Y5G1 929 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 KMOO15229 486 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 CNOT3O75175 753 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 FAM200BP0CF97 657 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 SARSP49591 514 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 ILF2Q12905 390 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 SMCO1Q147U7 214 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 SUCOQ9UBS9 1254 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 PABPC1P11940 636 aaKnown RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 GPD1P21695 349 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 MTMR2Q13614 643 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 FAM84BQ96KN1 310 aaPredicted RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 TRIM51Q9BSJ1 452 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 NIF3L1Q9GZT8 377 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 PHF11Q9UIL8 331 aa12.41□□□□□ -0.42
PCF11-201ENST00000298281 MORC2Q9Y6X9 1032 aaPredicted RBP12.41□□□□□ -0.42
PCF11-201ENST00000298281 CKBP12277 381 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 UQCRBP14927 111 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 FGFR2P21802 821 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 AVPR1AP37288 418 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GJA8P48165 433 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ACOT2P49753 483 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CPT1AP50416 773 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ZNF284Q2VY69 593 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ATF7IP2Q5U623 682 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 BRSK2Q8IWQ3 736 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 DAW1Q8N136 415 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ATP6V0D2Q8N8Y2 350 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CHST13Q8NET6 341 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 TMA7Q9Y2S6 64 aaKnown RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 SAMD9LQ8IVG5 1584 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 ATG7O95352 703 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GARTP22102 1010 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 HOXC12P31275 282 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 FNTAP49354 379 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 RGS7P49802 495 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ZNF177Q13360 481 aaPredicted RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 EMC2Q15006 297 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ADSSL1Q8N142 457 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GPRASP2Q96D09 838 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 KLHL28Q9NXS3 571 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 FAM220BPB1ANY3 271 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CCND1P24385 295 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 TGFBR2P37173 567 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 PTGER2P43116 358 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 BNC1Q01954 994 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GRB14Q14449 540 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 DDR2Q16832 855 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CARNMT1Q8N4J0 409 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 KCNN2Q9H2S1 579 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 DNAJC11Q9NVH1 559 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ARIH1Q9Y4X5 557 aaPredicted RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 FLT1P17948 1338 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ATP5F1P24539 256 aaPredicted RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 CLK3P49761 638 aaKnown RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 CAV3P56539 151 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 MRNIPQ6NTE8 343 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 ATG16L2Q8NAA4 619 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CYFIP2Q96F07 1278 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 CIPCQ9C0C6 399 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 WEE2P0C1S8 567 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GYS2P54840 703 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 UTP15Q8TED0 518 aaKnown RBP12.4□□□□□ -0.42
PCF11-201ENST00000298281 RACGAP1Q9H0H5 632 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 GGT7Q9UJ14 662 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 KIAA1257Q9ULG3 409 aa12.4□□□□□ -0.42
PCF11-201ENST00000298281 PP2D1A8MPX8 630 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 MGRN1O60291 552 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 ATP6V1B1P15313 513 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 GNA13Q14344 377 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 PPIL6Q8IXY8 311 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 COLGALT2Q8IYK4 626 aa12.4□□□□□ -0.43
PCF11-201ENST00000298281 MARCH10Q8NA82 808 aaPredicted RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms