RNA–Protein interactions for RNA: ENST00000297615.9

TTC39B-201, Transcript of tetratricopeptide repeat domain 39B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39B, Length 3,053 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39B-201ENST00000297615 STRIP2Q9ULQ0 834 aa14.06□□□□□ -0.16
TTC39B-201ENST00000297615 CAPN9O14815 690 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 METTL18O95568 372 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 AMHP03971 560 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 MCF2P10911 925 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PYGBP11216 843 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 SURF1Q15526 300 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 DUSP28Q4G0W2 176 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PPIL6Q8IXY8 311 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PRR11Q96HE9 360 aaPredicted RBP14.05□□□□□ -0.16
TTC39B-201ENST00000297615 CELF6Q96J87 481 aaKnown RBP14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PPP1R36Q96LQ0 422 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 NCAPGQ9BPX3 1015 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 IQCGQ9H095 443 aaKnown RBP14.05□□□□□ -0.16
TTC39B-201ENST00000297615 CXorf56Q9H5V9 222 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PCDH9Q9HC56 1237 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 ARMCX1Q9P291 453 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 RABGEF1Q9UJ41 708 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 CNTN6Q9UQ52 1028 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 LCTP09848 1927 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 KPNA7A9QM74 516 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 IL18RAPO95256 599 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 INHBAP08476 426 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 TPH1P17752 444 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 BGNP21810 368 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 PTK7Q13308 1070 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 ATP11CQ8NB49 1132 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 MYCBPQ99417 103 aaPredicted RBP14.05□□□□□ -0.16
TTC39B-201ENST00000297615 BCO2Q9BYV7 579 aa14.05□□□□□ -0.16
TTC39B-201ENST00000297615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 A6NJR5 290 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 C2CD4BA6NLJ0 364 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ALOX15BO15296 676 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MAGEB2O15479 319 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 LPXNO60711 386 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 OAS1P00973 400 aaKnown RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 CYP2F1P24903 491 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ALDH3A1P30838 453 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 HDAC4P56524 1084 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MFSD10Q14728 455 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 FBXO47Q5MNV8 452 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 C16orf46Q6P387 395 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 PIGZQ86VD9 579 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 LONP2Q86WA8 852 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 AGGF1Q8N302 714 aaeCLIP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 PLD5Q8N7P1 536 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 RNF34Q969K3 372 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SHCBP1LQ9BZQ2 653 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ABHD16BQ9H3Z7 469 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 DDX56Q9NY93 547 aaKnown RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 LGALS13Q9UHV8 139 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 XIRP2A4UGR9 3374 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MGAMO43451 1857 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 LSM8O95777 96 aaKnown RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 OR4Q2P0C623 313 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 USP17L7P0C7H9 530 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SLC8A1P32418 973 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 PHBP35232 272 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 CACNA2D1P54289 1103 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ARPP19P56211 112 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 PREPLQ4J6C6 727 aaPredicted RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 LDLRAD1Q5T700 205 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 KCNT2Q6UVM3 1135 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 OSTM1Q86WC4 334 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SLC35B2Q8TB61 432 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 TTC25Q96NG3 672 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MIOSQ9NXC5 875 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ZFP69BQ9UJL9 534 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 M0QYT0 321 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SCAMP3O14828 347 aaKnown RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 ENTPD5O75356 428 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MOCS2O96007 188 aaPredicted RBP14.04□□□□□ -0.16
TTC39B-201ENST00000297615 BRCC3P46736 316 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 AP3M2P53677 418 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SNX17Q15036 470 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 PLEKHG4Q58EX7 1191 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 C9orf57Q5W0N0 161 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SLC27A1Q6PCB7 646 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 NLRP9Q7RTR0 991 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 SLC7A14Q8TBB6 771 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 CNPY3Q9BT09 278 aa14.04□□□□□ -0.16
TTC39B-201ENST00000297615 MYBPHLA2RUH7 354 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
TTC39B-201ENST00000297615 ITGAVP06756 1048 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 SULT1E1P49888 294 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 SCNN1GP51170 649 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 ZNF143P52747 638 aaPredicted RBP14.03□□□□□ -0.16
TTC39B-201ENST00000297615 RCN2Q14257 317 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 CST9Q5W186 159 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 APBB1IPQ7Z5R6 666 aaPredicted RBP14.03□□□□□ -0.16
TTC39B-201ENST00000297615 PDCD7Q8N8D1 485 aaKnown RBP14.03□□□□□ -0.16
TTC39B-201ENST00000297615 BEST2Q8NFU1 509 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 TTC8Q8TAM2 541 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 SERAC1Q96JX3 654 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 PCDH18Q9HCL0 1135 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 NKX1-2Q9UD57 310 aaPredicted RBP14.03□□□□□ -0.16
TTC39B-201ENST00000297615 PCDHGC3Q9UN70 934 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 NUMBLQ9Y6R0 609 aa14.03□□□□□ -0.16
TTC39B-201ENST00000297615 HUS1O60921 280 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms