RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 CRISPLD2Q9H0B8 497 aa22.24■■□□□ 1.15
SOX17-201ENST00000297316 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.24■■□□□ 1.15
SOX17-201ENST00000297316 DSEQ9UL01 958 aa22.24■■□□□ 1.15
SOX17-201ENST00000297316 USP17L7P0C7H9 530 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 PTPN9P43378 593 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 NRLP54845 237 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 YWHAHQ04917 246 aaPredicted RBP22.23■■□□□ 1.15
SOX17-201ENST00000297316 EFHC1Q5JVL4 640 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 NINJ2Q9NZG7 142 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 KANSL3Q9P2N6 904 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 PCDHB8Q9UN66 801 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 FNDC1Q4ZHG4 1894 aaPredicted RBP22.23■■□□□ 1.15
SOX17-201ENST00000297316 SYNJ2BP-COX16A0A087WUM0 186 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 YJEFN3A6XGL0 299 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 E7ENQ6 273 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 SCNN1AP37088 669 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 OTUD1Q5VV17 481 aaPredicted RBP22.23■■□□□ 1.15
SOX17-201ENST00000297316 UNC45BQ8IWX7 931 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 BBOF1Q8ND07 529 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 CENPIQ92674 756 aaPredicted RBP22.23■■□□□ 1.15
SOX17-201ENST00000297316 COX16Q9P0S2 106 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 LRFN2Q9ULH4 789 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 MICAL3Q7RTP6 2002 aa22.23■■□□□ 1.15
SOX17-201ENST00000297316 NT5C1B-RDH14C9J2C7 533 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 APOC4-APOC2K7ER74 178 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 APOC2P02655 101 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 MATKP42679 507 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 YWHAZP63104 245 aaKnown RBP22.22■■□□□ 1.15
SOX17-201ENST00000297316 HOOK3Q86VS8 718 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 CRIPAKQ8N1N5 446 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 CCDC185Q8N715 623 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 ELAC1Q9H777 363 aaKnown RBP22.22■■□□□ 1.15
SOX17-201ENST00000297316 PCDH9Q9HC56 1237 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 NAALADL1Q9UQQ1 740 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 ATP11BQ9Y2G3 1177 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 EIF3HO15372 352 aaKnown RBP eCLIP22.22■■□□□ 1.15
SOX17-201ENST00000297316 FYNP06241 537 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 SULT1E1P49888 294 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 SRLQ86TD4 932 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 THEM5Q8N1Q8 247 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 ZCCHC9Q8N567 271 aaKnown RBP22.22■■□□□ 1.15
SOX17-201ENST00000297316 TTC13Q8NBP0 860 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 ZNF333Q96JL9 665 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 C9orf72Q96LT7 481 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 PCDH18Q9HCL0 1135 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 TMPRSS4Q9NRS4 437 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 SLC12A6Q9UHW9 1150 aa22.22■■□□□ 1.15
SOX17-201ENST00000297316 TADA2AO75478 443 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 TTC4O95801 387 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 TYMPP19971 482 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 DAOAP59103 153 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 IFI35P80217 286 aaPredicted RBP22.21■■□□□ 1.15
SOX17-201ENST00000297316 RAB41Q5JT25 222 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 RNASEH2BQ5TBB1 312 aaKnown RBP22.21■■□□□ 1.15
SOX17-201ENST00000297316 ARCQ7LC44 396 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 FAM131BQ86XD5 332 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 ADAM32Q8TC27 787 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 CCHCR1Q8TD31 782 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 TMEM109Q9BVC6 243 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 CSNK1G1Q9HCP0 422 aa22.21■■□□□ 1.15
SOX17-201ENST00000297316 TPX2Q9ULW0 747 aaKnown RBP22.21■■□□□ 1.15
SOX17-201ENST00000297316 MYO1CO00159 1063 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 EIF3EP60228 445 aaKnown RBP22.2■■□□□ 1.15
SOX17-201ENST00000297316 GAD2Q05329 585 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 KRT81Q14533 505 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 LONRF1Q17RB8 773 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 PPP6R3Q5H9R7 873 aaPredicted RBP22.2■■□□□ 1.15
SOX17-201ENST00000297316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.2■■□□□ 1.15
SOX17-201ENST00000297316 CEP57Q86XR8 500 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 TAB3Q8N5C8 712 aaPredicted RBP22.2■■□□□ 1.15
SOX17-201ENST00000297316 PQLC3Q8N755 202 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 STKLD1Q8NE28 680 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 RNF157Q96PX1 679 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 GPR62Q9BZJ7 368 aa22.2■■□□□ 1.15
SOX17-201ENST00000297316 RRP15Q9Y3B9 282 aaKnown RBP22.2■■□□□ 1.15
SOX17-201ENST00000297316 TMEM189-UBE2V1I3L0A0 370 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 DAB1O75553 588 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 UPP2O95045 317 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 COL6A1P12109 1028 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 CYP2F1P24903 491 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 TSPY1Q01534 308 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 BOLA3Q53S33 107 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 TMEM173Q86WV6 379 aaPredicted RBP22.2■■□□□ 1.14
SOX17-201ENST00000297316 SPATA18Q8TC71 538 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 APBB2Q92870 758 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 PGM2Q96G03 612 aa22.2■■□□□ 1.14
SOX17-201ENST00000297316 TBKBP1A7MCY6 615 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 CXCL10P02778 98 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 RPL22P35268 128 aaKnown RBP22.19■■□□□ 1.14
SOX17-201ENST00000297316 MDH1P40925 334 aaKnown RBP22.19■■□□□ 1.14
SOX17-201ENST00000297316 SLC11A1P49279 550 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 PPP2R2AP63151 447 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 SLC25A52Q3SY17 297 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 SLC39A12Q504Y0 691 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 C1orf228Q6PIY5 440 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 BHLHA9Q7RTU4 235 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 PYROXD2Q8N2H3 581 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 SCAMP5Q8TAC9 235 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 TEKT4Q8WW24 435 aa22.19■■□□□ 1.14
SOX17-201ENST00000297316 VWCEQ96DN2 955 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms