RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 EML3Q32P44 896 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 NBPF20Q3BBV1 942 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 DCAF4L1Q3SXM0 396 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 LCLAT1Q6UWP7 414 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 TRPM8Q7Z2W7 1104 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 UNC5BQ8IZJ1 945 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 ARRDC4Q8NCT1 418 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 UNKQ9C0B0 810 aaKnown RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 LHX5Q9H2C1 402 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 SMYD2Q9NRG4 433 aa9.66□□□□□ -0.86
PRDM9-201ENST00000296682 G3BP2Q9UN86 482 aaKnown RBP9.66□□□□□ -0.86
PRDM9-201ENST00000296682 C2CD4BA6NLJ0 364 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CCT8L1PA6NM43 557 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TRIM49D1C9J1S8 452 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 HMBSP08397 361 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 RPSAP08865 295 aaKnown RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CPT1AP50416 773 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 GEMIN4P57678 1058 aaKnown RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TRIM32Q13049 653 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 ANKRD20A8PQ5CZ79 823 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 C6orf89Q6UWU4 347 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 HFE2Q6ZVN8 426 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 IGDCC3Q8IVU1 814 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TP53INP2Q8IXH6 220 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PLD5Q8N7P1 536 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PCDH19Q8TAB3 1148 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TCP10LQ8TDR4 215 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 GPR152Q8TDT2 470 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 MAML1Q92585 1016 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 KAT2BQ92831 832 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 SENP8Q96LD8 212 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 ZNF560Q96MR9 790 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 ZIC5Q96T25 663 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 BCO2Q9BYV7 579 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 ULBP1Q9BZM6 244 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 DNAI2Q9GZS0 605 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TSPYL2Q9H2G4 693 aaPredicted RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CD248Q9HCU0 757 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PCDH10Q9P2E7 1040 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 SLC17A6Q9P2U8 582 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 FNDC3AQ9Y2H6 1198 aaKnown RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 USP15Q9Y4E8 981 aaPredicted RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 TSC2P49815 1807 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 MYBPHLA2RUH7 354 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CD4P01730 458 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 BDNFP23560 247 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CD52P31358 61 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 CLCNKBP51801 687 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 LILRA4P59901 499 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 SLC1A5Q15758 541 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 RNASEH2BQ5TBB1 312 aaKnown RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 SYPL2Q5VXT5 272 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 VSTM1Q6UX27 236 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PRCCQ92733 491 aaPredicted RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 RILPQ96NA2 401 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 FERMT1Q9BQL6 677 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PCDH18Q9HCL0 1135 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 ACSS2Q9NR19 701 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PCMTD2Q9NV79 361 aa9.65□□□□□ -0.86
PRDM9-201ENST00000296682 PSMC3IPQ9P2W1 217 aaPredicted RBP9.65□□□□□ -0.86
PRDM9-201ENST00000296682 DOCK3Q8IZD9 2030 aa9.65□□□□□ -0.87
PRDM9-201ENST00000296682 C2orf71A6NGG8 1288 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 UGT1A9O60656 530 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 OR4Q2P0C623 313 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 GNAT1P11488 350 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 SCTRP47872 440 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 BST2Q10589 180 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 PCGF5Q86SE9 256 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 RSPH3Q86UC2 560 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ZNF410Q86VK4 478 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 B3GALNT2Q8NCR0 500 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ERP27Q96DN0 273 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 PPP1R36Q96LQ0 422 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 TTC25Q96NG3 672 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 UGT1A7Q9HAW7 530 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 UGT1A10Q9HAW8 530 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 UGT1A8Q9HAW9 530 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 SLC17A7Q9P2U7 560 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 COPEO14579 308 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 THP07101 528 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 BCAT1P54687 386 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 COPS2P61201 443 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 MXRA7P84157 204 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 RCN2Q14257 317 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 OASLQ15646 514 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 LRRC38Q5VT99 294 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 MAMDC4Q6UXC1 1216 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 SPATS2Q86XZ4 545 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 CYTH2Q99418 400 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 NFKBIZQ9BYH8 718 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ECT2Q9H8V3 914 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 UBN1Q9NPG3 1134 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 CFAP69A5D8W1 941 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 H0Y3Z8 333 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 DFFAO00273 331 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 ITGAVP06756 1048 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 PTPN1P18031 435 aaKnown RBP9.64□□□□□ -0.87
PRDM9-201ENST00000296682 EPHB2P29323 1055 aa9.64□□□□□ -0.87
PRDM9-201ENST00000296682 TKTP29401 623 aaKnown RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms