RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 LYPLA2O95372 231 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 CCDC130P13994 396 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 SGCGQ13326 291 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 DCLRE1AQ6PJP8 1040 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRPF18Q99633 342 aaKnown RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 PHF20L1A8MW92 1017 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 MEFVO15553 781 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 MMP3P08254 477 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 PRLRP16471 622 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 SERPINB4P48594 390 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 C18orf25Q96B23 403 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 SELENONQ9NZV5 590 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 A0A087X0B3 334 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 ACBD5Q5T8D3 534 aaPredicted RBP18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 NLRP14Q86W24 1093 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 NCKAP1Q9Y2A7 1128 aa18.26■□□□□ 0.51
CDC42EP3-201ENST00000295324 TOMM70O94826 608 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 IGSF6O95976 241 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 SNHG28P0DPA3 235 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 PSEN1P49768 467 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 DDX42Q86XP3 938 aaKnown RBP eCLIP18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 ACTL9Q8TC94 416 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 AVENQ9NQS1 362 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 LNPEPQ9UIQ6 1025 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 HECTD3Q5T447 861 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 MRPS23Q9Y3D9 190 aaKnown RBP18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 USP17L7P0C7H9 530 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 MYO1HQ8N1T3 1032 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 NRBF2Q96F24 287 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 HSFY1Q96LI6 401 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 TRIM49D1C9J1S8 452 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 NFICP08651 508 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 GRM5P41594 1212 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 CNGA2Q16280 664 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 ILDR1Q86SU0 546 aaPredicted RBP18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 CCDC33Q8N5R6 958 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 CELF6Q96J87 481 aaKnown RBP18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 GPR20Q99678 358 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 YY1AP1Q9H869 796 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
CDC42EP3-201ENST00000295324 TRAV19A0A0A6YYK7 116 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 DMTNQ08495 405 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 PHACTR4Q8IZ21 702 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 KCTD10Q9H3F6 313 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 RNF103-CHMP3A0A140T963 221 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 AGBL2Q5U5Z8 902 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CA12O43570 354 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 SELPP16109 830 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 PTPN7P35236 360 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 ATXN3P54252 364 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 GYS2P54840 703 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 LENG9Q96B70 501 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 SYTL2Q9HCH5 934 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CDY1Q9Y6F8 540 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 SPACA6W5XKT8 324 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 TCP11X1B4DZS4 312 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 GLP2RO95838 553 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 KRT16P08779 473 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 NPR3P17342 541 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CYP2C18P33260 490 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 NUMBP49757 651 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CAMK2GQ13555 558 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CUL3Q13618 768 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 C3orf20Q8ND61 904 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 ARL8AQ96BM9 186 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 NFKBIZQ9BYH8 718 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 ROBO3Q96MS0 1386 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 TISP43B9A030 160 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 NFKBIEO00221 500 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 NOS2P35228 1153 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 ITGB3BPQ13352 177 aaPredicted RBP18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 KRT72Q14CN4 511 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 TRHDEQ9UKU6 1024 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 CAPN6Q9Y6Q1 641 aa18.24■□□□□ 0.51
CDC42EP3-201ENST00000295324 E5RJQ4 531 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 NR2C2P49116 596 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 HSDL1Q3SXM5 330 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 COLGALT1Q8NBJ5 622 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 LPCAT1Q8NF37 534 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SUSD6Q92537 303 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 KLF6Q99612 283 aaPredicted RBP18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 APOL2Q9BQE5 337 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ZCCHC2Q9C0B9 1178 aaKnown RBP18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 PPP4R4Q6NUP7 873 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ABHD15Q6UXT9 468 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SPATA21Q7Z572 469 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SLC9A9Q8IVB4 645 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 LPPQ93052 612 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 CCDC126Q96EE4 140 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 SPG21Q9NZD8 308 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 WHRNQ9P202 907 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 KIF17Q9P2E2 1029 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 ADGRA2Q96PE1 1338 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 POLR2EP19388 210 aaKnown RBP18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 RAP1GDS1P52306 607 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 CBWD6Q4V339 395 aa18.23■□□□□ 0.51
CDC42EP3-201ENST00000295324 CBWD3Q5JTY5 395 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms