RNA–Protein interactions for RNA: ENST00000294728.6

VCAM1-201, Transcript of vascular cell adhesion molecule 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCAM1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-201ENST00000294728 COPEO14579 308 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RNF8O76064 485 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 SNUPNO95149 360 aaKnown RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 APOEP02649 317 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 BPGMP07738 259 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 GRK2P25098 689 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 IL1R2P27930 398 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ADSLP30566 484 aaPredicted RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RFC1P35251 1148 aaPredicted RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ELK3P41970 407 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 PSMC4P43686 418 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 IREB2P48200 963 aaKnown RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RPL34P49207 117 aaKnown RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ACOT2P49753 483 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 NUMBP49757 651 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 SLC26A2P50443 739 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 GDF10P55107 478 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 BACE1P56817 501 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 BAATQ14032 418 aaPredicted RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 MAP3K21Q5TCX8 1036 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 METTL21CQ5VZV1 264 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 FAM160B1Q5W0V3 765 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 TXNRD3NBQ6F5E7 133 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 LLGL2Q6P1M3 1020 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RINLQ6ZS11 566 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ACAD11Q709F0 780 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ANKRD13AQ8IZ07 590 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 TTC17Q96AE7 1141 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 OLFM3Q96PB7 478 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RNF157Q96PX1 679 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 BTBD9Q96Q07 612 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 SRPK1Q96SB4 655 aaKnown RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 PPP1R12CQ9BZL4 782 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 ACAD9Q9H845 621 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 PAPOLBQ9NRJ5 636 aaKnown RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 KRT82Q9NSB4 513 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 MOCS1Q9NZB8 636 aa6.4□□□□□ -1.39
VCAM1-201ENST00000294728 RCOR3Q9P2K3 495 aaPredicted RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 COL4A4P53420 1690 aaPredicted RBP6.4□□□□□ -1.39
VCAM1-201ENST00000294728 BTBD19C9JJ37 291 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 PI4K2BG5E9Z4 385 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CAPN9O14815 690 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 RBP3P10745 1247 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 VDRP11473 427 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MYCLP12524 364 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CPOXP36551 454 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 PGM1P36871 562 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MNX1P50219 401 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 SNX16P57768 344 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 YWHAZP63104 245 aaKnown RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MRPS5P82675 430 aaKnown RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CAPSQ13938 189 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CCDC6Q16204 474 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 KCTD19Q17RG1 926 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 HSF5Q4G112 596 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 NOL9Q5SY16 702 aaKnown RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 FAXCQ5TGI0 409 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 TMEM154Q6P9G4 183 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 PLPPR4Q7Z2D5 763 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 UNC45BQ8IWX7 931 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 SCUBE1Q8IWY4 988 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 NME8Q8N427 588 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 GSDMBQ8TAX9 411 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CXorf38Q8TB03 319 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 E2F7Q96AV8 911 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 HAPLN3Q96S86 360 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 TEX13BQ9BXU2 312 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 TMEM39BQ9GZU3 492 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 KLC2Q9H0B6 622 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 ASCC2Q9H1I8 757 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 FZD8Q9H461 694 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 RPAP3Q9H6T3 665 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MRM3Q9HC36 420 aaKnown RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 DMAP1Q9NPF5 467 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 PLK2Q9NYY3 685 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 FBXO40Q9UH90 709 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 USP18Q9UMW8 372 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 C2CD4BA6NLJ0 364 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 HACD1B0YJ81 288 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 SPECC1L-ADORA2AF8WAN1 911 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 STRNO43815 780 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 H2AFYO75367 372 aaKnown RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CIB2O75838 187 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CST3P01034 146 aaPredicted RBP6.39□□□□□ -1.39
VCAM1-201ENST00000294728 TNNC2P02585 160 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MYL2P10916 166 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 ANPEPP15144 967 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MAGEA12P43365 314 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 CDK7P50613 346 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 MXRA7P84157 204 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 DSG1Q02413 1049 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 PPARDQ03181 441 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 FAAP100Q0VG06 881 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 TUBB3Q13509 450 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 SEMA5AQ13591 1074 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 STXBP2Q15833 593 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 KBTBD12Q3ZCT8 623 aa6.39□□□□□ -1.39
VCAM1-201ENST00000294728 SH3D19Q5HYK7 790 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms